RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 TFCP2Q12800 502 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 CAVIN4Q5BKX8 364 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 LTBP1Q14766 1721 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 RAB11FIP3O75154 756 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 ATP2B3Q16720 1220 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 LPIN2Q92539 896 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 GCC1Q96CN9 775 aa20.88■□□□□ 0.93
HLA-F-218ENST00000376861 DUOX1Q9NRD9 1551 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 SNAP23O00161 211 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 ZNF804AQ7Z570 1209 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 VGLL2Q8N8G2 317 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 KIF1BPQ96EK5 621 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 NEUROD6Q96NK8 337 aa20.87■□□□□ 0.93
HLA-F-218ENST00000376861 DICER1Q9UPY3 1922 aaKnown RBP20.87■□□□□ 0.93
HLA-F-218ENST00000376861 EIF6P56537 245 aaKnown RBP20.86■□□□□ 0.93
HLA-F-218ENST00000376861 DOK7Q18PE1 504 aa20.86■□□□□ 0.93
HLA-F-218ENST00000376861 GORABQ5T7V8 394 aa20.86■□□□□ 0.93
HLA-F-218ENST00000376861 SMC5Q8IY18 1101 aa20.86■□□□□ 0.93
HLA-F-218ENST00000376861 DBNDD1Q9H9R9 158 aa20.86■□□□□ 0.93
HLA-F-218ENST00000376861 WTIPA6NIX2 430 aaPredicted RBP20.85■□□□□ 0.93
HLA-F-218ENST00000376861 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
HLA-F-218ENST00000376861 ECE2O60344 883 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 SASH1O94885 1247 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 DPY19L2Q6NUT2 758 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 COA1Q9GZY4 146 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 DCTPP1Q9H773 170 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 ZNRF3Q9ULT6 936 aa20.84■□□□□ 0.93
HLA-F-218ENST00000376861 ZC3H4Q9UPT8 1303 aaKnown RBP20.84■□□□□ 0.93
HLA-F-218ENST00000376861 A0A1B0GUL7 405 aa20.83■□□□□ 0.93
HLA-F-218ENST00000376861 HIBADHP31937 336 aaKnown RBP20.83■□□□□ 0.93
HLA-F-218ENST00000376861 PRELPP51888 382 aa20.83■□□□□ 0.93
HLA-F-218ENST00000376861 CLASRPQ8N2M8 674 aaKnown RBP20.83■□□□□ 0.93
HLA-F-218ENST00000376861 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
HLA-F-218ENST00000376861 LRRCC1Q9C099 1032 aa20.83■□□□□ 0.93
HLA-F-218ENST00000376861 TIAM2Q8IVF5 1701 aa20.83■□□□□ 0.93
HLA-F-218ENST00000376861 UTRNP46939 3433 aa20.83■□□□□ 0.92
HLA-F-218ENST00000376861 TIMM10P62072 90 aa20.83■□□□□ 0.92
HLA-F-218ENST00000376861 C15orf52Q6ZUT6 534 aaKnown RBP20.83■□□□□ 0.92
HLA-F-218ENST00000376861 PODNQ7Z5L7 613 aa20.83■□□□□ 0.92
HLA-F-218ENST00000376861 FBXW7Q969H0 707 aa20.83■□□□□ 0.92
HLA-F-218ENST00000376861 FGFR2P21802 821 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 KLRK1P26718 216 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 GYG1P46976 350 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 TNNI3KQ59H18 835 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 TXNRD3Q86VQ6 643 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 IL1RAPL2Q9NP60 686 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 GPR108Q9NPR9 543 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
HLA-F-218ENST00000376861 FPGT-TNNI3KV9GXZ4 949 aa20.82■□□□□ 0.92
HLA-F-218ENST00000376861 IFIT2P09913 472 aaKnown RBP20.8■□□□□ 0.92
HLA-F-218ENST00000376861 TNIP1Q15025 636 aa20.8■□□□□ 0.92
HLA-F-218ENST00000376861 AACSQ86V21 672 aa20.8■□□□□ 0.92
HLA-F-218ENST00000376861 CD209Q9NNX6 404 aa20.8■□□□□ 0.92
HLA-F-218ENST00000376861 FZD9O00144 591 aa20.79■□□□□ 0.92
HLA-F-218ENST00000376861 XAGE2Q96GT9 111 aa20.79■□□□□ 0.92
HLA-F-218ENST00000376861 GJA3Q9Y6H8 435 aa20.79■□□□□ 0.92
HLA-F-218ENST00000376861 ZNF609O15014 1411 aa20.79■□□□□ 0.92
HLA-F-218ENST00000376861 RAD17O75943 681 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 YY1P25490 414 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 CCDC158Q5M9N0 1113 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 CIAPIN1Q6FI81 312 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 FAM84BQ96KN1 310 aaPredicted RBP20.78■□□□□ 0.92
HLA-F-218ENST00000376861 BCAMP50895 628 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 NUCB1Q02818 461 aa20.78■□□□□ 0.92
HLA-F-218ENST00000376861 ANKRD45Q5TZF3 282 aa20.77■□□□□ 0.92
HLA-F-218ENST00000376861 TTLL5Q6EMB2 1281 aa20.77■□□□□ 0.92
HLA-F-218ENST00000376861 FBXO33Q7Z6M2 555 aa20.77■□□□□ 0.92
HLA-F-218ENST00000376861 CCDC8Q9H0W5 538 aaPredicted RBP20.77■□□□□ 0.92
HLA-F-218ENST00000376861 USP17L3A6NCW0 530 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 USP17L4A6NCW7 530 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 YDJCA8MPS7 323 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 ADORA1P30542 326 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 CXCL9Q07325 125 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 TTC39AQ5SRH9 613 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 USP17L1Q7RTZ2 530 aa20.76■□□□□ 0.91
HLA-F-218ENST00000376861 IQSEC3Q9UPP2 1182 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-218ENST00000376861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-218ENST00000376861 COL4A5P29400 1685 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-218ENST00000376861 IL1R1P14778 569 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 CCDC102BQ68D86 513 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 CHD1LQ86WJ1 897 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 GPC2Q8N158 579 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 ZNF526Q8TF50 670 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-218ENST00000376861 ARAP2Q8WZ64 1704 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 EAF2Q96CJ1 260 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-218ENST00000376861 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 IRS2Q9Y4H2 1338 aa20.75■□□□□ 0.91
HLA-F-218ENST00000376861 GTF2IP78347 998 aa20.74■□□□□ 0.91
HLA-F-218ENST00000376861 DBNDD2Q9BQY9 259 aa20.74■□□□□ 0.91
HLA-F-218ENST00000376861 MYH13Q9UKX3 1938 aa20.74■□□□□ 0.91
HLA-F-218ENST00000376861 UQCRFS1P1P0C7P4 283 aa20.73■□□□□ 0.91
HLA-F-218ENST00000376861 PHKA1P46020 1223 aa20.73■□□□□ 0.91
HLA-F-218ENST00000376861 CHAF1AQ13111 956 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-218ENST00000376861 TDRD7Q8NHU6 1098 aaKnown RBP20.73■□□□□ 0.91
HLA-F-218ENST00000376861 GPATCH3Q96I76 525 aa20.73■□□□□ 0.91
HLA-F-218ENST00000376861 PSMD14O00487 310 aa20.73■□□□□ 0.91
HLA-F-218ENST00000376861 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms