RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 F6X3S4 739 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 USP17L8P0C7I0 530 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 HUNKP57058 714 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 ANKRD2Q9GZV1 360 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 SPEF2Q9C093 1822 aa26.76■■□□□ 1.88
VSX1-201ENST00000376707 GMLQ99445 158 aa26.76■■□□□ 1.87
VSX1-201ENST00000376707 CACNA1FO60840 1977 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 ASTN2O75129 1339 aaPredicted RBP26.75■■□□□ 1.87
VSX1-201ENST00000376707 BEND3Q5T5X7 828 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 C2orf69Q8N8R5 385 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 FBXW7Q969H0 707 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 COA1Q9GZY4 146 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 GBA2Q9HCG7 927 aaPredicted RBP26.75■■□□□ 1.87
VSX1-201ENST00000376707 ZNF804BA4D1E1 1349 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 ANKRD18BA2A2Z9 1011 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 SCARF1Q14162 830 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 MYOZ2Q9NPC6 264 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 ANGEL2Q5VTE6 544 aaKnown RBP26.73■■□□□ 1.87
VSX1-201ENST00000376707 KCNJ4P48050 445 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 TXNRD3Q86VQ6 643 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 PSME4Q14997 1843 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 ZNF521Q96K83 1311 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 BRPF1P55201 1214 aaPredicted RBP26.71■■□□□ 1.87
VSX1-201ENST00000376707 NOGQ13253 232 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 IFIT5Q13325 482 aaKnown RBP26.71■■□□□ 1.87
VSX1-201ENST00000376707 DACT2Q5SW24 774 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 STRIP1Q5VSL9 837 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 MYO3BQ8WXR4 1341 aa26.7■■□□□ 1.87
VSX1-201ENST00000376707 FOXO4P98177 505 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CHRNDQ07001 517 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 OGFOD1Q8N543 542 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CDCA5Q96FF9 252 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 MXD3Q9BW11 206 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CA12O43570 354 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 KLRK1P26718 216 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 RGMBQ6NW40 437 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 TSKSQ9UJT2 592 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 GRM8O00222 908 aa26.68■■□□□ 1.86
VSX1-201ENST00000376707 SLC4A10Q6U841 1118 aa26.68■■□□□ 1.86
VSX1-201ENST00000376707 C9orf78Q9NZ63 289 aaPredicted RBP26.68■■□□□ 1.86
VSX1-201ENST00000376707 PITPNM2Q9BZ72 1349 aa26.67■■□□□ 1.86
VSX1-201ENST00000376707 LMBR1LQ6UX01 489 aa26.67■■□□□ 1.86
VSX1-201ENST00000376707 ZNF157P51786 506 aaPredicted RBP26.66■■□□□ 1.86
VSX1-201ENST00000376707 TTLL5Q6EMB2 1281 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 CCDC102AQ96A19 550 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 SRCIN1Q9C0H9 1055 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 POLR2AP24928 1970 aaKnown RBP26.66■■□□□ 1.86
VSX1-201ENST00000376707 TAF5LO75529 589 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 ALDH1L1O75891 902 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 TAF7LQ5H9L4 462 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 HELBQ8NG08 1087 aaPredicted RBP26.65■■□□□ 1.86
VSX1-201ENST00000376707 GTF2IP78347 998 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 NBPF9Q3BBW0 867 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 EPHA10Q5JZY3 1008 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 ZIC5Q96T25 663 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 FAM155AB1AL88 458 aaPredicted RBP26.63■■□□□ 1.85
VSX1-201ENST00000376707 MMP14P50281 582 aa26.63■■□□□ 1.85
VSX1-201ENST00000376707 CD209Q9NNX6 404 aa26.63■■□□□ 1.85
VSX1-201ENST00000376707 SNAP23O00161 211 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 HDAC9Q9UKV0 1011 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 SCAF8Q9UPN6 1271 aaKnown RBP26.62■■□□□ 1.85
VSX1-201ENST00000376707 WNT10BO00744 389 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 FKBP1BP68106 108 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 LDHAL6AQ6ZMR3 332 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 ZNF594Q96JF6 807 aaPredicted RBP26.61■■□□□ 1.85
VSX1-201ENST00000376707 CNNM1Q9NRU3 951 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 C15orf52Q6ZUT6 534 aaKnown RBP26.6■■□□□ 1.85
VSX1-201ENST00000376707 ZNF804AQ7Z570 1209 aa26.6■■□□□ 1.85
VSX1-201ENST00000376707 PLIN1O60240 522 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 SASH1O94885 1247 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 KIF23Q02241 960 aaPredicted RBP26.59■■□□□ 1.85
VSX1-201ENST00000376707 IRS2Q9Y4H2 1338 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 ZNF646O15015 1829 aaPredicted RBP26.58■■□□□ 1.85
VSX1-201ENST00000376707 E9PSI1 815 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 SLC10A3P09131 477 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 ABHD8Q96I13 439 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 PRAMEF18Q5VWM3 479 aa26.57■■□□□ 1.84
VSX1-201ENST00000376707 MRPL50Q8N5N7 158 aaKnown RBP26.57■■□□□ 1.84
VSX1-201ENST00000376707 SUCLG2Q96I99 432 aa26.57■■□□□ 1.84
VSX1-201ENST00000376707 CCER2I3L3R5 266 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 NBPF7P0C2Y1 421 aaPredicted RBP26.55■■□□□ 1.84
VSX1-201ENST00000376707 NF2P35240 595 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 PAPPA2Q9BXP8 1791 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 IL1R1P14778 569 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 TTLL12Q14166 644 aaPredicted RBP26.54■■□□□ 1.84
VSX1-201ENST00000376707 RASAL3Q86YV0 1011 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 APOBEC3FQ8IUX4 373 aaKnown RBP26.54■■□□□ 1.84
VSX1-201ENST00000376707 PTPRCP08575 1304 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 DLGAP5Q15398 846 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 MOB2Q70IA6 237 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 CERS5Q8N5B7 392 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 KAZALD1Q96I82 304 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 SAGE1Q9NXZ1 904 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 UTYO14607 1347 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 UBE2Q2LH0YL09 131 aa26.52■■□□□ 1.84
VSX1-201ENST00000376707 ZBED3Q96IU2 234 aaPredicted RBP26.52■■□□□ 1.84
VSX1-201ENST00000376707 A0A1B0GUL6 1792 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms