RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 F6X3S4 739 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 USP17L8P0C7I0 530 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 HUNKP57058 714 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 ANKRD2Q9GZV1 360 aa26.77■■□□□ 1.88
VSX1-201ENST00000376707 SPEF2Q9C093 1822 aa26.76■■□□□ 1.88
VSX1-201ENST00000376707 GMLQ99445 158 aa26.76■■□□□ 1.87
VSX1-201ENST00000376707 CACNA1FO60840 1977 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 ASTN2O75129 1339 aaPredicted RBP26.75■■□□□ 1.87
VSX1-201ENST00000376707 BEND3Q5T5X7 828 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 C2orf69Q8N8R5 385 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 FBXW7Q969H0 707 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 COA1Q9GZY4 146 aa26.75■■□□□ 1.87
VSX1-201ENST00000376707 GBA2Q9HCG7 927 aaPredicted RBP26.75■■□□□ 1.87
VSX1-201ENST00000376707 ZNF804BA4D1E1 1349 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 ANKRD18BA2A2Z9 1011 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 SCARF1Q14162 830 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 MYOZ2Q9NPC6 264 aa26.74■■□□□ 1.87
VSX1-201ENST00000376707 ANGEL2Q5VTE6 544 aaKnown RBP26.73■■□□□ 1.87
VSX1-201ENST00000376707 KCNJ4P48050 445 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 TXNRD3Q86VQ6 643 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 PSME4Q14997 1843 aa26.72■■□□□ 1.87
VSX1-201ENST00000376707 ZNF521Q96K83 1311 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 BRPF1P55201 1214 aaPredicted RBP26.71■■□□□ 1.87
VSX1-201ENST00000376707 NOGQ13253 232 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 IFIT5Q13325 482 aaKnown RBP26.71■■□□□ 1.87
VSX1-201ENST00000376707 DACT2Q5SW24 774 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 STRIP1Q5VSL9 837 aa26.71■■□□□ 1.87
VSX1-201ENST00000376707 MYO3BQ8WXR4 1341 aa26.7■■□□□ 1.87
VSX1-201ENST00000376707 FOXO4P98177 505 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CHRNDQ07001 517 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 OGFOD1Q8N543 542 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CDCA5Q96FF9 252 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 MXD3Q9BW11 206 aa26.7■■□□□ 1.86
VSX1-201ENST00000376707 CA12O43570 354 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 KLRK1P26718 216 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 RGMBQ6NW40 437 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 TSKSQ9UJT2 592 aa26.69■■□□□ 1.86
VSX1-201ENST00000376707 GRM8O00222 908 aa26.68■■□□□ 1.86
VSX1-201ENST00000376707 SLC4A10Q6U841 1118 aa26.68■■□□□ 1.86
VSX1-201ENST00000376707 C9orf78Q9NZ63 289 aaPredicted RBP26.68■■□□□ 1.86
VSX1-201ENST00000376707 PITPNM2Q9BZ72 1349 aa26.67■■□□□ 1.86
VSX1-201ENST00000376707 LMBR1LQ6UX01 489 aa26.67■■□□□ 1.86
VSX1-201ENST00000376707 ZNF157P51786 506 aaPredicted RBP26.66■■□□□ 1.86
VSX1-201ENST00000376707 TTLL5Q6EMB2 1281 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 CCDC102AQ96A19 550 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 SRCIN1Q9C0H9 1055 aa26.66■■□□□ 1.86
VSX1-201ENST00000376707 POLR2AP24928 1970 aaKnown RBP26.66■■□□□ 1.86
VSX1-201ENST00000376707 TAF5LO75529 589 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 ALDH1L1O75891 902 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 TAF7LQ5H9L4 462 aa26.65■■□□□ 1.86
VSX1-201ENST00000376707 HELBQ8NG08 1087 aaPredicted RBP26.65■■□□□ 1.86
VSX1-201ENST00000376707 GTF2IP78347 998 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 NBPF9Q3BBW0 867 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 EPHA10Q5JZY3 1008 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 ZIC5Q96T25 663 aa26.64■■□□□ 1.86
VSX1-201ENST00000376707 FAM155AB1AL88 458 aaPredicted RBP26.63■■□□□ 1.85
VSX1-201ENST00000376707 MMP14P50281 582 aa26.63■■□□□ 1.85
VSX1-201ENST00000376707 CD209Q9NNX6 404 aa26.63■■□□□ 1.85
VSX1-201ENST00000376707 SNAP23O00161 211 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 KIAA0825Q8IV33 1275 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 HDAC9Q9UKV0 1011 aa26.62■■□□□ 1.85
VSX1-201ENST00000376707 SCAF8Q9UPN6 1271 aaKnown RBP26.62■■□□□ 1.85
VSX1-201ENST00000376707 WNT10BO00744 389 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 FKBP1BP68106 108 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 LDHAL6AQ6ZMR3 332 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 ZNF594Q96JF6 807 aaPredicted RBP26.61■■□□□ 1.85
VSX1-201ENST00000376707 CNNM1Q9NRU3 951 aa26.61■■□□□ 1.85
VSX1-201ENST00000376707 C15orf52Q6ZUT6 534 aaKnown RBP26.6■■□□□ 1.85
VSX1-201ENST00000376707 ZNF804AQ7Z570 1209 aa26.6■■□□□ 1.85
VSX1-201ENST00000376707 PLIN1O60240 522 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 SASH1O94885 1247 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 KIF23Q02241 960 aaPredicted RBP26.59■■□□□ 1.85
VSX1-201ENST00000376707 IRS2Q9Y4H2 1338 aa26.59■■□□□ 1.85
VSX1-201ENST00000376707 ZNF646O15015 1829 aaPredicted RBP26.58■■□□□ 1.85
VSX1-201ENST00000376707 E9PSI1 815 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 SLC10A3P09131 477 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 ABHD8Q96I13 439 aa26.58■■□□□ 1.85
VSX1-201ENST00000376707 PRAMEF18Q5VWM3 479 aa26.57■■□□□ 1.84
VSX1-201ENST00000376707 MRPL50Q8N5N7 158 aaKnown RBP26.57■■□□□ 1.84
VSX1-201ENST00000376707 SUCLG2Q96I99 432 aa26.57■■□□□ 1.84
VSX1-201ENST00000376707 CCER2I3L3R5 266 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 NBPF7P0C2Y1 421 aaPredicted RBP26.55■■□□□ 1.84
VSX1-201ENST00000376707 NF2P35240 595 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 PAPPA2Q9BXP8 1791 aa26.55■■□□□ 1.84
VSX1-201ENST00000376707 IL1R1P14778 569 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 TTLL12Q14166 644 aaPredicted RBP26.54■■□□□ 1.84
VSX1-201ENST00000376707 RASAL3Q86YV0 1011 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 APOBEC3FQ8IUX4 373 aaKnown RBP26.54■■□□□ 1.84
VSX1-201ENST00000376707 PTPRCP08575 1304 aa26.54■■□□□ 1.84
VSX1-201ENST00000376707 DLGAP5Q15398 846 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 MOB2Q70IA6 237 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 CERS5Q8N5B7 392 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 KAZALD1Q96I82 304 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 SAGE1Q9NXZ1 904 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 UTYO14607 1347 aa26.53■■□□□ 1.84
VSX1-201ENST00000376707 UBE2Q2LH0YL09 131 aa26.52■■□□□ 1.84
VSX1-201ENST00000376707 ZBED3Q96IU2 234 aaPredicted RBP26.52■■□□□ 1.84
VSX1-201ENST00000376707 A0A1B0GUL6 1792 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms