RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 RNF113AO15541 343 aaKnown RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 UQCRHP07919 91 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 SLC5A1P13866 664 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 RXRBP28702 533 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 SPATA31A3Q5VYP0 1347 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 PTCH1Q13635 1447 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 CTDSPL2Q05D32 466 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 C6orf229H3BNL8 230 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 RPS6KB1P23443 525 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 USP5P45974 858 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 METAP2P50579 478 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC6-203ENST00000376619 GPAA1O43292 621 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 MBD4O95243 580 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 HOXB7P09629 217 aa13□□□□□ -0.33
HDAC6-203ENST00000376619 BRD1O95696 1058 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 CYP21A2P08686 494 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 LIG1P18858 919 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 KBTBD3Q8NAB2 608 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 PIGBQ92521 554 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 CRB1P82279 1406 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 MCM5P33992 734 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
HDAC6-203ENST00000376619 PTPN21Q16825 1174 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
HDAC6-203ENST00000376619 CPLX3Q8WVH0 158 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 ADD1P35611 737 aaKnown RBP12.99□□□□□ -0.33
HDAC6-203ENST00000376619 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 ZNF772Q68DY9 489 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-203ENST00000376619 NBPF10Q6P3W6 841 aaKnown RBP12.99□□□□□ -0.33
HDAC6-203ENST00000376619 NBPF15Q8N660 670 aa12.99□□□□□ -0.33
HDAC6-203ENST00000376619 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 BCAMP50895 628 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 ZSCAN25Q6NSZ9 544 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 ZSCAN29Q8IWY8 852 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-203ENST00000376619 PHKA1P46020 1223 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 ADCY9O60503 1353 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
HDAC6-203ENST00000376619 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
HDAC6-203ENST00000376619 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-203ENST00000376619 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 POLR1AO95602 1720 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-203ENST00000376619 GYG1P46976 350 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 KDRP35968 1356 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 GNPATO15228 680 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 MKNK2Q9HBH9 465 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
HDAC6-203ENST00000376619 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.96□□□□□ -0.33
HDAC6-203ENST00000376619 V9GYY5 206 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-203ENST00000376619 SETBP1Q9Y6X0 1596 aa12.96□□□□□ -0.33
HDAC6-203ENST00000376619 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-203ENST00000376619 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
HDAC6-203ENST00000376619 INTS4Q96HW7 963 aaKnown RBP12.96□□□□□ -0.33
HDAC6-203ENST00000376619 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
HDAC6-203ENST00000376619 HSPD1P10809 573 aaKnown RBP12.96□□□□□ -0.34
HDAC6-203ENST00000376619 OLFM4Q6UX06 510 aa12.96□□□□□ -0.34
HDAC6-203ENST00000376619 PLIN2Q99541 437 aa12.96□□□□□ -0.34
HDAC6-203ENST00000376619 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.34
HDAC6-203ENST00000376619 HMG20BQ9P0W2 317 aa12.96□□□□□ -0.34
HDAC6-203ENST00000376619 CLIP2Q9UDT6 1046 aa12.96□□□□□ -0.34
HDAC6-203ENST00000376619 MST1RQ04912 1400 aa12.96□□□□□ -0.34
HDAC6-203ENST00000376619 E7EWF7 191 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ZBTB43O43298 467 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 FGAP02671 866 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 SSBP05455 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 AFMP43652 599 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 POLA2Q14181 598 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 NOC3LQ8WTT2 800 aaKnown RBP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ZHX3Q9H4I2 956 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 BABAM1Q9NWV8 329 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 RIMBP2O15034 1052 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ATP5JP18859 108 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 RFC4P35249 363 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ZNF532Q9HCE3 1301 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 TYRO3Q06418 890 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-203ENST00000376619 ANKRD18AQ8IVF6 992 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 STAMQ92783 540 aa12.95□□□□□ -0.34
HDAC6-203ENST00000376619 CCDC34Q96HJ3 373 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms