RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 OSBP2Q969R2 916 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 NLRP3Q96P20 1036 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 CDC5LQ99459 802 aaKnown RBP15.13■□□□□ 0.01
CLCN6-206ENST00000376496 MAST3O60307 1309 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 MYO5AQ9Y4I1 1855 aaKnown RBP15.13■□□□□ 0.01
CLCN6-206ENST00000376496 GYS1P13807 737 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 SLC5A1P13866 664 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 NYXQ9GZU5 481 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 ZNF827Q17R98 1081 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 SLC10A5Q5PT55 438 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
CLCN6-206ENST00000376496 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 IDH1O75874 414 aaKnown RBP15.12■□□□□ 0.01
CLCN6-206ENST00000376496 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
CLCN6-206ENST00000376496 PKP1Q13835 747 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 HMG20BQ9P0W2 317 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 KLRK1P26718 216 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 GYG1P46976 350 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 AK2P54819 239 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 RASGRF1Q13972 1273 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 SLC27A3Q5K4L6 730 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 RTL9Q8NET4 1388 aa15.12■□□□□ 0.01
CLCN6-206ENST00000376496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLCN6-206ENST00000376496 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
CLCN6-206ENST00000376496 MINPP1Q9UNW1 487 aa15.11■□□□□ 0.01
CLCN6-206ENST00000376496 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
CLCN6-206ENST00000376496 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
CLCN6-206ENST00000376496 CNBD1Q8NA66 436 aa15.11■□□□□ 0.01
CLCN6-206ENST00000376496 COL24A1Q17RW2 1714 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 TTLL5Q6EMB2 1281 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 IL17RAQ96F46 866 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
CLCN6-206ENST00000376496 RPS8P62241 208 aaKnown RBP15.1■□□□□ 0.01
CLCN6-206ENST00000376496 PRR5LQ6MZQ0 368 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 TTC14Q96N46 770 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 LARGE1O95461 756 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 SSFA2P28290 1259 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 TM4SF1P30408 202 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 RUFY3Q7L099 469 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
CLCN6-206ENST00000376496 RFX7Q2KHR2 1363 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 ARID4AP29374 1257 aaPredicted RBP15.09■□□□□ 0.01
CLCN6-206ENST00000376496 FOXD4L5Q5VV16 416 aaPredicted RBP15.09■□□□□ 0.01
CLCN6-206ENST00000376496 FOXD4L4Q8WXT5 416 aaPredicted RBP15.09■□□□□ 0.01
CLCN6-206ENST00000376496 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 BSDC1Q9NW68 430 aaPredicted RBP15.09■□□□□ 0.01
CLCN6-206ENST00000376496 CYP21A2P08686 494 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 DDR1Q08345 913 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 KCNB2Q92953 911 aa15.09■□□□□ 0.01
CLCN6-206ENST00000376496 HSPD1P10809 573 aaKnown RBP15.08■□□□□ 0
CLCN6-206ENST00000376496 PDRG1Q9NUG6 133 aa15.08■□□□□ 0
CLCN6-206ENST00000376496 SERPINB2P05120 415 aa15.08■□□□□ 0
CLCN6-206ENST00000376496 ADRA2BP18089 450 aa15.08■□□□□ 0
CLCN6-206ENST00000376496 TNPO1Q92973 898 aaKnown RBP15.08■□□□□ 0
CLCN6-206ENST00000376496 ZSWIM6Q9HCJ5 1215 aa15.08■□□□□ 0
CLCN6-206ENST00000376496 RGL2O15211 777 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 FOXP2O15409 715 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 CYP46A1Q9Y6A2 500 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 HAND2P61296 217 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 STOX1Q6ZVD7 989 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 COL23A1Q86Y22 540 aaPredicted RBP15.07■□□□□ 0
CLCN6-206ENST00000376496 CHAMP1Q96JM3 812 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 JAG2Q9Y219 1238 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 ZNF532Q9HCE3 1301 aa15.07■□□□□ 0
CLCN6-206ENST00000376496 RNF20Q5VTR2 975 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 MSL1Q68DK7 614 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
CLCN6-206ENST00000376496 LRRC2Q9BYS8 371 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 ADD2P35612 726 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 ZNF512BQ96KM6 892 aaPredicted RBP15.06■□□□□ 0
CLCN6-206ENST00000376496 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CLCN6-206ENST00000376496 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
CLCN6-206ENST00000376496 PDE6AP16499 860 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 APPBP2Q92624 585 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 ARAP2Q8WZ64 1704 aa15.06■□□□□ 0
CLCN6-206ENST00000376496 GPAA1O43292 621 aa15.05■□□□□ 0
CLCN6-206ENST00000376496 MAGEB6Q8N7X4 407 aa15.05■□□□□ 0
CLCN6-206ENST00000376496 NECAB1Q8N987 351 aa15.05■□□□□ 0
CLCN6-206ENST00000376496 RAB3GAP1Q15042 981 aa15.05■□□□□ -0
CLCN6-206ENST00000376496 BLOC1S2Q6QNY1 142 aa15.05■□□□□ -0
CLCN6-206ENST00000376496 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.05■□□□□ -02e-6■■■■■ 28.9
CLCN6-206ENST00000376496 ABCF2Q9UG63 623 aa15.05■□□□□ -0
CLCN6-206ENST00000376496 MCM2P49736 904 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 CHST3Q7LGC8 479 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 FAM84BQ96KN1 310 aaPredicted RBP15.04■□□□□ -0
CLCN6-206ENST00000376496 MYH7P12883 1935 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 A0A1B0GUL6 1792 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 GOLGB1Q14789 3259 aaKnown RBP15.04■□□□□ -0
CLCN6-206ENST00000376496 VPS37DQ86XT2 251 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 AKT1S1Q96B36 256 aa15.04■□□□□ -0
CLCN6-206ENST00000376496 POLRMTO00411 1230 aaKnown RBP15.03■□□□□ -0
CLCN6-206ENST00000376496 PLSCR1O15162 318 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms