RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
ZNF550-203ENST00000376230 CLEC17AQ6ZS10 378 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
ZNF550-203ENST00000376230 SEC31BQ9NQW1 1179 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 PYCARDQ9ULZ3 195 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 KRT32Q14532 448 aa11.77□□□□□ -0.52
ZNF550-203ENST00000376230 ERICH2A1L162 156 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 ZNF165P49910 485 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 SCARF1Q14162 830 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 MEX3CQ5U5Q3 659 aaKnown RBP11.77□□□□□ -0.53
ZNF550-203ENST00000376230 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 MAGEB6Q8N7X4 407 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 CCDC94Q9BW85 323 aaPredicted RBP11.77□□□□□ -0.53
ZNF550-203ENST00000376230 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.53
ZNF550-203ENST00000376230 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
ZNF550-203ENST00000376230 HOXB7P09629 217 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 LRMPQ12912 555 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 PDIA6Q15084 440 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 MYRIPQ8NFW9 859 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 PIGBQ92521 554 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
ZNF550-203ENST00000376230 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 ARMT1Q9H993 441 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 CCDC69A6NI79 296 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 IGHMBP2P38935 993 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 INTS4Q96HW7 963 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 DENND2AQ9ULE3 1009 aa11.76□□□□□ -0.53
ZNF550-203ENST00000376230 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
ZNF550-203ENST00000376230 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
ZNF550-203ENST00000376230 DDB1Q16531 1140 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 G3V3G9 751 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 GPAA1O43292 621 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 NR1I2O75469 434 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 PHKA1P46020 1223 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 DCAF8Q5TAQ9 597 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 UIMC1Q96RL1 719 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 TFCP2L1Q9NZI6 479 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 AKAP2Q9Y2D5 859 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
ZNF550-203ENST00000376230 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 DHX32Q7L7V1 743 aaKnown RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 HOMER1Q86YM7 354 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 PXDNQ92626 1479 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 RICTORQ6R327 1708 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 E7EWF7 191 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 M0R2C6 588 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 MBD4O95243 580 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 DHX8Q14562 1220 aaKnown RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 NECTIN1Q15223 517 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 NRBP1Q9UHY1 535 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 ADGRL3Q9HAR2 1447 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 BCAMP50895 628 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 TYRO3Q06418 890 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 SCRN1Q12765 414 aa11.74□□□□□ -0.53
ZNF550-203ENST00000376230 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
ZNF550-203ENST00000376230 GOLGA8AA7E2F4 631 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 ATP5JP18859 108 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 ERICH4A6NGS2 130 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 FGAP02671 866 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 TNNT1P13805 278 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 UBAC1Q9BSL1 405 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 CYP7A1P22680 504 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 TERF1P54274 439 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 TCIRG1Q13488 830 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 CUL4AQ13619 759 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 CTNNA3Q9UI47 895 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
ZNF550-203ENST00000376230 F8W031 263 aaPredicted RBP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 PRKAB2O43741 272 aa11.72□□□□□ -0.53
ZNF550-203ENST00000376230 LETM1O95202 739 aaPredicted RBP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 METAP2P50579 478 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 TRERF1Q96PN7 1200 aa11.72□□□□□ -0.53
ZNF550-203ENST00000376230 GYG1P46976 350 aa11.72□□□□□ -0.53
ZNF550-203ENST00000376230 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
ZNF550-203ENST00000376230 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
ZNF550-203ENST00000376230 KCNQ2O43526 872 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms