RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 GRAPQ13588 217 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 C15orf52Q6ZUT6 534 aaKnown RBP13.4□□□□□ -0.26
PDPN-202ENST00000376057 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 GRAPLQ8TC17 118 aaPredicted RBP13.4□□□□□ -0.26
PDPN-202ENST00000376057 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 SEMA3EO15041 775 aa13.4□□□□□ -0.27
PDPN-202ENST00000376057 COL23A1Q86Y22 540 aaPredicted RBP13.4□□□□□ -0.27
PDPN-202ENST00000376057 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.27
PDPN-202ENST00000376057 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 A0A0D9SFI3 127 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 GOLIM4O00461 696 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 MCAMP43121 646 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 FAM227BQ96M60 508 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 CRAMP1Q96RY5 1269 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 HMG20BQ9P0W2 317 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 ST18O60284 1047 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 TAF5LO75529 589 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
PDPN-202ENST00000376057 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
PDPN-202ENST00000376057 TAF1P21675 1872 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 DDR1Q08345 913 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDPN-202ENST00000376057 IRS2Q9Y4H2 1338 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
PDPN-202ENST00000376057 LTBP1Q14766 1721 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 DUOX1Q9NRD9 1551 aa13.38□□□□□ -0.27
PDPN-202ENST00000376057 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
PDPN-202ENST00000376057 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 EDC3Q96F86 508 aaKnown RBP13.37□□□□□ -0.27
PDPN-202ENST00000376057 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
PDPN-202ENST00000376057 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 BBOX1O75936 387 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 ZAP70P43403 619 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 PTH1RQ03431 593 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 SCARF1Q14162 830 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
PDPN-202ENST00000376057 KIAA1551Q9HCM1 1747 aa13.37□□□□□ -0.27
PDPN-202ENST00000376057 PHKA1P46020 1223 aa13.36□□□□□ -0.27
PDPN-202ENST00000376057 RNF20Q5VTR2 975 aa13.36□□□□□ -0.27
PDPN-202ENST00000376057 SPATA5Q8NB90 893 aa13.36□□□□□ -0.27
PDPN-202ENST00000376057 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
PDPN-202ENST00000376057 CYP2E1P05181 493 aaPredicted RBP13.36□□□□□ -0.27
PDPN-202ENST00000376057 DDIT3P35638 169 aa13.36□□□□□ -0.27
PDPN-202ENST00000376057 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
PDPN-202ENST00000376057 APPBP2Q92624 585 aa13.35□□□□□ -0.27
PDPN-202ENST00000376057 PALD1Q9ULE6 856 aa13.35□□□□□ -0.27
PDPN-202ENST00000376057 ADD2P35612 726 aa13.35□□□□□ -0.27
PDPN-202ENST00000376057 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDPN-202ENST00000376057 HELBQ8NG08 1087 aaPredicted RBP13.35□□□□□ -0.27
PDPN-202ENST00000376057 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
PDPN-202ENST00000376057 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
PDPN-202ENST00000376057 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
PDPN-202ENST00000376057 CAVIN4Q5BKX8 364 aa13.35□□□□□ -0.27
PDPN-202ENST00000376057 ZNF589Q86UQ0 364 aaPredicted RBP13.35□□□□□ -0.27
PDPN-202ENST00000376057 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
PDPN-202ENST00000376057 KRT32Q14532 448 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 CREB3L3Q68CJ9 461 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
PDPN-202ENST00000376057 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 DENND2AQ9ULE3 1009 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
PDPN-202ENST00000376057 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 TCRBV5S4A2TA0A5A2 114 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 RASGRF1Q13972 1273 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 STK32BQ9NY57 414 aa13.34□□□□□ -0.27
PDPN-202ENST00000376057 MAST3O60307 1309 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 XDHP47989 1333 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 NPHP1O15259 732 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 PSMA5P28066 241 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 PDE6BP35913 854 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
PDPN-202ENST00000376057 TTC14Q96N46 770 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 EP400Q96L91 3159 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 SLC27A2O14975 620 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 BAG6P46379 1132 aa13.33□□□□□ -0.28
PDPN-202ENST00000376057 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
PDPN-202ENST00000376057 EZH2Q15910 746 aaKnown RBP13.32□□□□□ -0.28
PDPN-202ENST00000376057 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
PDPN-202ENST00000376057 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 SALL1Q9NSC2 1324 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 NPR1P16066 1061 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 BCAMP50895 628 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 MAP3K12Q12852 859 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 VPS53Q5VIR6 699 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
PDPN-202ENST00000376057 COL11A2P13942 1736 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms