RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
CLCNKA-202ENST00000375692 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
CLCNKA-202ENST00000375692 USP16Q9Y5T5 823 aa16.58■□□□□ 0.24
CLCNKA-202ENST00000375692 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
CLCNKA-202ENST00000375692 EXOC5O00471 708 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 SLFNL1Q499Z3 407 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 DDX58O95786 925 aaKnown RBP16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 FGD1P98174 961 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 TFCP2Q12800 502 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 DDX21Q9NR30 783 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 CFAP45Q9UL16 551 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 PAXBP1Q9Y5B6 917 aa16.57■□□□□ 0.24
CLCNKA-202ENST00000375692 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 KRT32Q14532 448 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 PLCH1Q4KWH8 1693 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 FEZ1Q99689 392 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 ZSCAN16Q9H4T2 348 aaPredicted RBP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 TRMT1Q9NXH9 659 aaKnown RBP16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 SPATA31A5Q5VU36 1347 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 SPATA31A7Q8IWB4 1347 aa16.56■□□□□ 0.24
CLCNKA-202ENST00000375692 SLIT2O94813 1529 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 LRP6O75581 1613 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 SIPA1L3O60292 1781 aaPredicted RBP16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 GUCY1B3Q02153 619 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 MYD88Q99836 296 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 OGFRQ9NZT2 677 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 SKILP12757 684 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 CDC25BP30305 580 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 CCT2P78371 535 aaKnown RBP16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 GCKRQ14397 625 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 ZNF609O15014 1411 aa16.55■□□□□ 0.24
CLCNKA-202ENST00000375692 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 CTDNEP1O95476 244 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 ATP5JP18859 108 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 APOBRQ0VD83 1088 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 SNW1Q13573 536 aaKnown RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 TNNI3KQ59H18 835 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 FPGT-TNNI3KV9GXZ4 949 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 BCL9LQ86UU0 1499 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 SHANK3Q9BYB0 1731 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 BECN2A8MW95 431 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 STX1AQ16623 288 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 SARM1Q6SZW1 724 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
CLCNKA-202ENST00000375692 CCDC69A6NI79 296 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 SYCP1Q15431 976 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 DHX40Q8IX18 779 aaKnown RBP16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 PIGBQ92521 554 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 MRFAP1L1Q96HT8 127 aa16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 ZNF215Q9UL58 517 aaPredicted RBP16.53■□□□□ 0.24
CLCNKA-202ENST00000375692 CAVIN2O95810 425 aa16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 RBM6P78332 1123 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 PTPN12Q05209 780 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 PTPN14Q15678 1187 aa16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 DDB1Q16531 1140 aa16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 MCMDC2Q4G0Z9 681 aa16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 CGNQ9P2M7 1197 aaKnown RBP16.52■□□□□ 0.24
CLCNKA-202ENST00000375692 A0A0G2JS52 829 aa16.52■□□□□ 0.23
CLCNKA-202ENST00000375692 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.23
CLCNKA-202ENST00000375692 PFKFB2O60825 505 aa16.52■□□□□ 0.23
CLCNKA-202ENST00000375692 CHST3Q7LGC8 479 aa16.52■□□□□ 0.23
CLCNKA-202ENST00000375692 USP21Q9UK80 565 aa16.52■□□□□ 0.23
CLCNKA-202ENST00000375692 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 CCZ1BP86790 482 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 CCZ1P86791 482 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 FMNL2Q96PY5 1086 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
CLCNKA-202ENST00000375692 MRC1P22897 1456 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms