RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 FBXO3Q9UK99 471 aa21.72■■□□□ 1.07
C6orf48-207ENST00000375642 GJA3Q9Y6H8 435 aa21.72■■□□□ 1.07
C6orf48-207ENST00000375642 SNAP23O00161 211 aa21.71■■□□□ 1.07
C6orf48-207ENST00000375642 CXCL9Q07325 125 aa21.71■■□□□ 1.07
C6orf48-207ENST00000375642 PNMA6EA0A0J9YXQ4 647 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 YDJCA8MPS7 323 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 RAD17O75943 681 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 CIAO1O76071 339 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 ATP8B2P98198 1209 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 TNIP1Q15025 636 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 CIAPIN1Q6FI81 312 aa21.7■■□□□ 1.06
C6orf48-207ENST00000375642 PA2G4Q9UQ80 394 aaKnown RBP21.7■■□□□ 1.06
C6orf48-207ENST00000375642 KLRK1P26718 216 aa21.69■■□□□ 1.06
C6orf48-207ENST00000375642 IL15P40933 162 aaPredicted RBP21.69■■□□□ 1.06
C6orf48-207ENST00000375642 UBE4AQ14139 1066 aa21.69■■□□□ 1.06
C6orf48-207ENST00000375642 ATG9AQ7Z3C6 839 aa21.69■■□□□ 1.06
C6orf48-207ENST00000375642 TXNRD3Q86VQ6 643 aa21.69■■□□□ 1.06
C6orf48-207ENST00000375642 ZBTB40Q9NUA8 1239 aa21.69■■□□□ 1.06
C6orf48-207ENST00000375642 PDE8BO95263 885 aa21.68■■□□□ 1.06
C6orf48-207ENST00000375642 C15orf52Q6ZUT6 534 aaKnown RBP21.68■■□□□ 1.06
C6orf48-207ENST00000375642 PODNQ7Z5L7 613 aa21.68■■□□□ 1.06
C6orf48-207ENST00000375642 L3MBTL3Q96JM7 780 aaPredicted RBP21.68■■□□□ 1.06
C6orf48-207ENST00000375642 COA1Q9GZY4 146 aa21.68■■□□□ 1.06
C6orf48-207ENST00000375642 VGLL2Q8N8G2 317 aa21.67■■□□□ 1.06
C6orf48-207ENST00000375642 KCNQ5Q9NR82 932 aa21.67■■□□□ 1.06
C6orf48-207ENST00000375642 CEP126Q9P2H0 1117 aa21.67■■□□□ 1.06
C6orf48-207ENST00000375642 IQCA1LA6NCM1 817 aa21.66■■□□□ 1.06
C6orf48-207ENST00000375642 POLA2Q14181 598 aa21.66■■□□□ 1.06
C6orf48-207ENST00000375642 CEP85Q6P2H3 762 aa21.66■■□□□ 1.06
C6orf48-207ENST00000375642 SSH3Q8TE77 659 aa21.66■■□□□ 1.06
C6orf48-207ENST00000375642 IRS2Q9Y4H2 1338 aa21.65■■□□□ 1.06
C6orf48-207ENST00000375642 POTECB2RU33 542 aa21.65■■□□□ 1.06
C6orf48-207ENST00000375642 PSMD14O00487 310 aa21.65■■□□□ 1.06
C6orf48-207ENST00000375642 PUM3Q15397 648 aaKnown RBP21.65■■□□□ 1.06
C6orf48-207ENST00000375642 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
C6orf48-207ENST00000375642 G3BP1Q13283 466 aaKnown RBP eCLIP21.64■■□□□ 1.05
C6orf48-207ENST00000375642 HACL1Q9UJ83 578 aa21.64■■□□□ 1.05
C6orf48-207ENST00000375642 LMOD1P29536 600 aaPredicted RBP21.63■■□□□ 1.05
C6orf48-207ENST00000375642 GMPSP49915 693 aaPredicted RBP21.63■■□□□ 1.05
C6orf48-207ENST00000375642 CD209Q9NNX6 404 aa21.63■■□□□ 1.05
C6orf48-207ENST00000375642 USP17L3A6NCW0 530 aa21.62■■□□□ 1.05
C6orf48-207ENST00000375642 USP17L4A6NCW7 530 aa21.62■■□□□ 1.05
C6orf48-207ENST00000375642 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
C6orf48-207ENST00000375642 IFIT1P09914 478 aaKnown RBP21.62■■□□□ 1.05
C6orf48-207ENST00000375642 FGFR2P21802 821 aa21.62■■□□□ 1.05
C6orf48-207ENST00000375642 USP17L1Q7RTZ2 530 aa21.62■■□□□ 1.05
C6orf48-207ENST00000375642 RPAP2Q8IXW5 612 aaPredicted RBP21.62■■□□□ 1.05
C6orf48-207ENST00000375642 LPIN2Q92539 896 aa21.62■■□□□ 1.05
C6orf48-207ENST00000375642 SURF6O75683 361 aaKnown RBP21.61■■□□□ 1.05
C6orf48-207ENST00000375642 SLC5A1P13866 664 aa21.61■■□□□ 1.05
C6orf48-207ENST00000375642 HIBADHP31937 336 aaKnown RBP21.61■■□□□ 1.05
C6orf48-207ENST00000375642 GYG1P46976 350 aa21.61■■□□□ 1.05
C6orf48-207ENST00000375642 SCNN1DP51172 638 aa21.61■■□□□ 1.05
C6orf48-207ENST00000375642 CAVIN4Q5BKX8 364 aa21.61■■□□□ 1.05
C6orf48-207ENST00000375642 FAM84BQ96KN1 310 aaPredicted RBP21.61■■□□□ 1.05
C6orf48-207ENST00000375642 TAF1DQ9H5J8 278 aaPredicted RBP21.61■■□□□ 1.05
C6orf48-207ENST00000375642 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
C6orf48-207ENST00000375642 RPS12P25398 132 aaKnown RBP21.6■■□□□ 1.05
C6orf48-207ENST00000375642 EPHX2P34913 555 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 TFCP2Q12800 502 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 OS9Q13438 667 aaPredicted RBP21.6■■□□□ 1.05
C6orf48-207ENST00000375642 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 VPS37DQ86XT2 251 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 FBXW7Q969H0 707 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 CREBZFQ9NS37 354 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 GPRC5DQ9NZD1 345 aa21.6■■□□□ 1.05
C6orf48-207ENST00000375642 HMMRO75330 724 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 IL1R1P14778 569 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 EPS15P42566 896 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 STRIP1Q5VSL9 837 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 TTLL5Q6EMB2 1281 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 RSBN1LQ6PCB5 846 aaPredicted RBP21.59■■□□□ 1.05
C6orf48-207ENST00000375642 FBXO33Q7Z6M2 555 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 DPF2Q92785 391 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 MKRN1Q9UHC7 482 aaKnown RBP21.59■■□□□ 1.05
C6orf48-207ENST00000375642 NOP58Q9Y2X3 529 aaKnown RBP21.59■■□□□ 1.05
C6orf48-207ENST00000375642 A0A1B0GUL6 1792 aa21.59■■□□□ 1.05
C6orf48-207ENST00000375642 GTF2IP78347 998 aa21.58■■□□□ 1.05
C6orf48-207ENST00000375642 AKAP2Q9Y2D5 859 aa21.58■■□□□ 1.05
C6orf48-207ENST00000375642 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
C6orf48-207ENST00000375642 BCAMP50895 628 aa21.57■■□□□ 1.04
C6orf48-207ENST00000375642 DACT2Q5SW24 774 aa21.57■■□□□ 1.04
C6orf48-207ENST00000375642 PNMA8AQ86V59 439 aaPredicted RBP21.57■■□□□ 1.04
C6orf48-207ENST00000375642 AGBL3Q8NEM8 1001 aa21.57■■□□□ 1.04
C6orf48-207ENST00000375642 CNOT7Q9UIV1 285 aaKnown RBP21.57■■□□□ 1.04
C6orf48-207ENST00000375642 H7C1D1 291 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 SASH1O94885 1247 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 EAPPQ56P03 285 aaPredicted RBP21.56■■□□□ 1.04
C6orf48-207ENST00000375642 CHADLQ6NUI6 762 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 SIRT2Q8IXJ6 389 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 MICALL2Q8IY33 904 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 TDRD7Q8NHU6 1098 aaKnown RBP21.56■■□□□ 1.04
C6orf48-207ENST00000375642 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 CRBNQ96SW2 442 aa21.56■■□□□ 1.04
C6orf48-207ENST00000375642 TIMM10P62072 90 aa21.55■■□□□ 1.04
C6orf48-207ENST00000375642 ADARB2Q9NS39 739 aaKnown RBP21.55■■□□□ 1.04
C6orf48-207ENST00000375642 SCN9AQ15858 1988 aa21.55■■□□□ 1.04
C6orf48-207ENST00000375642 SCN4AP35499 1836 aa21.55■■□□□ 1.04
C6orf48-207ENST00000375642 MYO3BQ8WXR4 1341 aa21.55■■□□□ 1.04
C6orf48-207ENST00000375642 FRAT2O75474 233 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms