RNA–Protein interactions for RNA: ENST00000375430.8

GRTP1-202, Transcript of growth hormone regulated TBC protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GRTP1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRTP1-202ENST00000375430 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.2■■□□□ 1.62
GRTP1-202ENST00000375430 BLOC1S2Q6QNY1 142 aa25.19■■□□□ 1.62
GRTP1-202ENST00000375430 CCDC129Q6ZRS4 1044 aa25.19■■□□□ 1.62
GRTP1-202ENST00000375430 FKBP4Q02790 459 aaKnown RBP eCLIP25.19■■□□□ 1.62
GRTP1-202ENST00000375430 ANKRD1Q15327 319 aa25.19■■□□□ 1.62
GRTP1-202ENST00000375430 TXNRD1Q16881 649 aa25.19■■□□□ 1.62
GRTP1-202ENST00000375430 C4BP0C0L5 1744 aa25.18■■□□□ 1.62
GRTP1-202ENST00000375430 RPS6KB1P23443 525 aa25.18■■□□□ 1.62
GRTP1-202ENST00000375430 CCDC152Q4G0S7 254 aa25.18■■□□□ 1.62
GRTP1-202ENST00000375430 SCN7AQ01118 1682 aa25.17■■□□□ 1.62
GRTP1-202ENST00000375430 ZPR1O75312 459 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 FGFR2P21802 821 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 SCARF1Q14162 830 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 PUM3Q15397 648 aaKnown RBP25.16■■□□□ 1.62
GRTP1-202ENST00000375430 NARFQ9UHQ1 456 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 TAF6LQ9Y6J9 622 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 TRAPPC3LQ5T215 181 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 LPIN2Q92539 896 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 MAST3O60307 1309 aa25.16■■□□□ 1.62
GRTP1-202ENST00000375430 ZAP70P43403 619 aa25.15■■□□□ 1.62
GRTP1-202ENST00000375430 FAM177BA6PVY3 158 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 CYP21A2P08686 494 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 ARID4AP29374 1257 aaPredicted RBP25.14■■□□□ 1.61
GRTP1-202ENST00000375430 RFC4P35249 363 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 MCTP1Q6DN14 999 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 SMIM5Q71RC9 77 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 PROM2Q8N271 834 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 ARHGEF1Q92888 912 aaKnown RBP25.14■■□□□ 1.61
GRTP1-202ENST00000375430 NEK1Q96PY6 1258 aa25.14■■□□□ 1.61
GRTP1-202ENST00000375430 WDR33Q9C0J8 1336 aaKnown RBP25.14■■□□□ 1.61
GRTP1-202ENST00000375430 LARGE1O95461 756 aa25.13■■□□□ 1.61
GRTP1-202ENST00000375430 UQCRFS1P1P0C7P4 283 aa25.13■■□□□ 1.61
GRTP1-202ENST00000375430 ADRA2BP18089 450 aa25.13■■□□□ 1.61
GRTP1-202ENST00000375430 MCAMP43121 646 aa25.13■■□□□ 1.61
GRTP1-202ENST00000375430 MPHOSPH8Q99549 860 aa25.13■■□□□ 1.61
GRTP1-202ENST00000375430 LARP6Q9BRS8 491 aaKnown RBP25.13■■□□□ 1.61
GRTP1-202ENST00000375430 PHF14O94880 888 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 HSPD1P10809 573 aaKnown RBP25.12■■□□□ 1.61
GRTP1-202ENST00000375430 TTF1Q15361 905 aaPredicted RBP25.12■■□□□ 1.61
GRTP1-202ENST00000375430 ME3Q16798 604 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 SLFNL1Q499Z3 407 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 OSBP2Q969R2 916 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 LAMA4Q16363 1823 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 APPBP2Q92624 585 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 SEC31BQ9NQW1 1179 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 LMBRD1Q9NUN5 540 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 TPCN1Q9ULQ1 816 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 SMC3Q9UQE7 1217 aa25.12■■□□□ 1.61
GRTP1-202ENST00000375430 M0R2C6 588 aa25.11■■□□□ 1.61
GRTP1-202ENST00000375430 HMGB1P09429 215 aaKnown RBP25.11■■□□□ 1.61
GRTP1-202ENST00000375430 KLHL40Q2TBA0 621 aa25.11■■□□□ 1.61
GRTP1-202ENST00000375430 CCDC102BQ68D86 513 aa25.11■■□□□ 1.61
GRTP1-202ENST00000375430 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.11■■□□□ 1.61
GRTP1-202ENST00000375430 SLC5A1P13866 664 aa25.1■■□□□ 1.61
GRTP1-202ENST00000375430 IGHMBP2P38935 993 aaKnown RBP25.1■■□□□ 1.61
GRTP1-202ENST00000375430 COL9A3Q14050 684 aaPredicted RBP25.1■■□□□ 1.61
GRTP1-202ENST00000375430 TOB2Q14106 344 aaPredicted RBP25.1■■□□□ 1.61
GRTP1-202ENST00000375430 ZSCAN25Q6NSZ9 544 aa25.1■■□□□ 1.61
GRTP1-202ENST00000375430 CASZ1Q86V15 1759 aa25.1■■□□□ 1.61
GRTP1-202ENST00000375430 SF3B3Q15393 1217 aaKnown RBP25.09■■□□□ 1.61
GRTP1-202ENST00000375430 AMIGO3Q86WK7 504 aa25.09■■□□□ 1.61
GRTP1-202ENST00000375430 GZF1Q9H116 711 aaPredicted RBP25.09■■□□□ 1.61
GRTP1-202ENST00000375430 SRP68Q9UHB9 627 aaKnown RBP25.09■■□□□ 1.61
GRTP1-202ENST00000375430 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.09■■□□□ 1.61
GRTP1-202ENST00000375430 SLC10A5Q5PT55 438 aa25.09■■□□□ 1.61
GRTP1-202ENST00000375430 CCDC83Q8IWF9 413 aa25.09■■□□□ 1.61
GRTP1-202ENST00000375430 PDIA4P13667 645 aaKnown RBP25.08■■□□□ 1.61
GRTP1-202ENST00000375430 PHKA1P46020 1223 aa25.08■■□□□ 1.61
GRTP1-202ENST00000375430 ST3GAL1Q11201 340 aa25.08■■□□□ 1.61
GRTP1-202ENST00000375430 PI16Q6UXB8 463 aa25.08■■□□□ 1.61
GRTP1-202ENST00000375430 BCL2L12Q9HB09 334 aa25.08■■□□□ 1.61
GRTP1-202ENST00000375430 COL24A1Q17RW2 1714 aa25.08■■□□□ 1.61
GRTP1-202ENST00000375430 FSD2A1L4K1 749 aa25.07■■□□□ 1.6
GRTP1-202ENST00000375430 ILDR1Q86SU0 546 aaPredicted RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 HELBQ8NG08 1087 aaPredicted RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 CDC5LQ99459 802 aaKnown RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 WASHC4Q2M389 1173 aa25.07■■□□□ 1.6
GRTP1-202ENST00000375430 CTNNA3Q9UI47 895 aa25.07■■□□□ 1.6
GRTP1-202ENST00000375430 ISY1Q9ULR0 285 aaKnown RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 DDX49Q9Y6V7 483 aaKnown RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 TNS1Q9HBL0 1735 aaKnown RBP25.07■■□□□ 1.6
GRTP1-202ENST00000375430 MYO5AQ9Y4I1 1855 aaKnown RBP25.06■■□□□ 1.6
GRTP1-202ENST00000375430 ADD2P35612 726 aa25.06■■□□□ 1.6
GRTP1-202ENST00000375430 ERFEQ4G0M1 354 aa25.06■■□□□ 1.6
GRTP1-202ENST00000375430 L1TD1Q5T7N2 865 aaKnown RBP25.06■■□□□ 1.6
GRTP1-202ENST00000375430 SETDB2Q96T68 719 aa25.06■■□□□ 1.6
GRTP1-202ENST00000375430 SYT1P21579 422 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 UBE3CQ15386 1083 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 TBC1D9BQ66K14 1250 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 BICDL1Q6ZP65 573 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 STOX1Q6ZVD7 989 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 DOCK2Q92608 1830 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 STX6O43752 255 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 ZSCAN22P10073 491 aaPredicted RBP25.05■■□□□ 1.6
GRTP1-202ENST00000375430 GJB2P29033 226 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 DHX32Q7L7V1 743 aaKnown RBP25.05■■□□□ 1.6
GRTP1-202ENST00000375430 NYXQ9GZU5 481 aa25.05■■□□□ 1.6
GRTP1-202ENST00000375430 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
GRTP1-202ENST00000375430 FOXD4L5Q5VV16 416 aaPredicted RBP25.04■■□□□ 1.6
GRTP1-202ENST00000375430 FOXD4L4Q8WXT5 416 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms