RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ANO2Q9NQ90 1003 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 AFF2P51816 1311 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 LOC102724159A0A0B4J2E5 919 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 CLCN6P51797 869 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 PWP2Q15269 919 aaKnown RBP14.2□□□□□ -0.14
C9orf3-203ENST00000375315 SYT1P21579 422 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 CDC25BP30305 580 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 PSEN1P49768 467 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 HLFQ16534 295 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 TMCO3Q6UWJ1 677 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 NCAPGQ9BPX3 1015 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 RAD50Q92878 1312 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 ABCA3Q99758 1704 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
C9orf3-203ENST00000375315 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 FILIP1Q7Z7B0 1213 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 LRRC8AQ8IWT6 810 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 TDRD7Q8NHU6 1098 aaKnown RBP14.19□□□□□ -0.14
C9orf3-203ENST00000375315 KAZALD1Q96I82 304 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 CCDC8Q9H0W5 538 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-203ENST00000375315 SMC3Q9UQE7 1217 aa14.19□□□□□ -0.14
C9orf3-203ENST00000375315 ERCC6LQ2NKX8 1250 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 ANO6Q4KMQ2 910 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 ELP1O95163 1332 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 COL16A1Q07092 1604 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-203ENST00000375315 AHDC1Q5TGY3 1603 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-203ENST00000375315 TRIM66O15016 1216 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 LMBR1LQ6UX01 489 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 KIF6Q6ZMV9 814 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 PLBD2Q8NHP8 589 aa14.18□□□□□ -0.14
C9orf3-203ENST00000375315 ZNF594Q96JF6 807 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-203ENST00000375315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-203ENST00000375315 GOLGB1Q14789 3259 aaKnown RBP14.18□□□□□ -0.14
C9orf3-203ENST00000375315 USP27XA6NNY8 438 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 SKILP12757 684 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 IL17RAQ96F46 866 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 AK7Q96M32 723 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 KDM3BQ7LBC6 1761 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 ALDH1L1O75891 902 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 GUCY2CP25092 1073 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 DNM1Q05193 864 aaKnown RBP14.17□□□□□ -0.14
C9orf3-203ENST00000375315 RHPN1Q8TCX5 695 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 TNMDQ9H2S6 317 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 PDE1AP54750 535 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 SIK1P57059 783 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 CCDC144CPQ8IYA2 1237 aa14.17□□□□□ -0.14
C9orf3-203ENST00000375315 QTRT2Q9H974 415 aaKnown RBP14.17□□□□□ -0.14
C9orf3-203ENST00000375315 A0A1B0GUL7 405 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 ATP8B1O43520 1251 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 G3BP1Q13283 466 aaKnown RBP eCLIP14.16□□□□□ -0.14
C9orf3-203ENST00000375315 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 CCDC24Q8N4L8 307 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 GOLGA5Q8TBA6 731 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 SMARCE1Q969G3 411 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 ITPK1Q13572 414 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 SRLQ86TD4 932 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 TRMT1Q9NXH9 659 aaKnown RBP14.16□□□□□ -0.14
C9orf3-203ENST00000375315 NDUFB9Q9Y6M9 179 aa14.16□□□□□ -0.14
C9orf3-203ENST00000375315 CAMK4Q16566 473 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 L2HGDHQ9H9P8 463 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 ZRANB2O95218 330 aaKnown RBP eCLIP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 ZNF165P49910 485 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 GYS2P54840 703 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 DZIP3Q86Y13 1208 aaKnown RBP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 ZNF622Q969S3 477 aaKnown RBP eCLIP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 CWC25Q9NXE8 425 aaPredicted RBP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 RRP15Q9Y3B9 282 aaKnown RBP14.15□□□□□ -0.14
C9orf3-203ENST00000375315 CAVIN2O95810 425 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 JRKLQ9Y4A0 524 aa14.15□□□□□ -0.14
C9orf3-203ENST00000375315 CRKLP46109 303 aaKnown RBP14.14□□□□□ -0.15
C9orf3-203ENST00000375315 ST5P78524 1137 aa14.14□□□□□ -0.15
C9orf3-203ENST00000375315 VPS72Q15906 364 aa14.14□□□□□ -0.15
C9orf3-203ENST00000375315 AACSQ86V21 672 aa14.14□□□□□ -0.15
C9orf3-203ENST00000375315 CKAP2LQ8IYA6 745 aa14.14□□□□□ -0.15
C9orf3-203ENST00000375315 GOLGA6L19H0YKK7 550 aa14.14□□□□□ -0.15
C9orf3-203ENST00000375315 GJD4Q96KN9 370 aaPredicted RBP14.14□□□□□ -0.15
C9orf3-203ENST00000375315 THRAP3Q9Y2W1 955 aaKnown RBP14.14□□□□□ -0.15
C9orf3-203ENST00000375315 C5P01031 1676 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 SNW1Q13573 536 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 TTC31Q49AM3 519 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 SEPT12Q8IYM1 358 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 UBXN4Q92575 508 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 CDCA7Q9BWT1 371 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 COL14A1Q05707 1796 aaKnown RBP14.13□□□□□ -0.15
C9orf3-203ENST00000375315 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 MRFAP1L1Q96HT8 127 aa14.13□□□□□ -0.15
C9orf3-203ENST00000375315 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms