RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 TULP2O00295 520 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 KRT86O43790 486 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
CD28-202ENST00000374481 CORO7P57737 925 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 LRRC23Q53EV4 343 aaPredicted RBP11.63□□□□□ -0.55
CD28-202ENST00000374481 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 SAMD15Q9P1V8 674 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 SAMD9Q5K651 1589 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 DDIT3P35638 169 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 ATP11AP98196 1134 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 IFT88Q13099 833 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
CD28-202ENST00000374481 GCOM1H8Y6P7 765 aaPredicted RBP11.62□□□□□ -0.55
CD28-202ENST00000374481 MYZAPP0CAP1 466 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 EFCAB2Q5VUJ9 269 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 CEP85Q6P2H3 762 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 IFT81Q8WYA0 676 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
CD28-202ENST00000374481 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 EPS15P42566 896 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 PLA2G4AP47712 749 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 VCXQ9H320 206 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 PSD3Q9NYI0 1048 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 ACTN3Q08043 901 aaPredicted RBP11.62□□□□□ -0.55
CD28-202ENST00000374481 MTX1Q13505 466 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 SPDL1Q96EA4 605 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 CTAGE1Q96RT6 745 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 TRIM4Q9C037 500 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 EPC1Q9H2F5 836 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
CD28-202ENST00000374481 RBM8AQ9Y5S9 174 aaKnown RBP11.62□□□□□ -0.55
CD28-202ENST00000374481 DESI2Q9BSY9 194 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 PPANQ9NQ55 473 aaKnown RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 CDC23Q9UJX2 597 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.61□□□□□ -0.55
CD28-202ENST00000374481 ERICH2A1L162 156 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 SPTLC2O15270 562 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 CDKL5O76039 1030 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 CCDC144BQ3MJ40 725 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 CCDC144CPQ8IYA2 1237 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 NEK1Q96PY6 1258 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 POGZQ7Z3K3 1410 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 LRRD1A4D1F6 860 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 SEPT7Q16181 437 aaKnown RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 CCDC38Q502W7 563 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 PSMD1Q99460 953 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 ABCB6Q9NP58 842 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 TROQ12816 1431 aaPredicted RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 GOLGA8KD6RF30 607 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 MARCH6O60337 910 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 PSMD2Q13200 908 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 KIF2CQ99661 725 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 TPX2Q9ULW0 747 aaKnown RBP11.61□□□□□ -0.55
CD28-202ENST00000374481 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
CD28-202ENST00000374481 CLTAP09496 248 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 PPARDQ03181 441 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 CNGA4Q8IV77 575 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 GCC2Q8IWJ2 1684 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 TACC1O75410 805 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 LUC7L3O95232 432 aaKnown RBP11.6□□□□□ -0.55
CD28-202ENST00000374481 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 TRIM68Q6AZZ1 485 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 LTV1Q96GA3 475 aaPredicted RBP11.6□□□□□ -0.55
CD28-202ENST00000374481 MBIPQ9NS73 344 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
CD28-202ENST00000374481 FHOD1Q9Y613 1164 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 PTPRCP08575 1304 aa11.6□□□□□ -0.55
CD28-202ENST00000374481 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 KRT83P78385 493 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 TSNAXIP1Q2TAA8 658 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 CCDC122Q5T0U0 273 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 PACS2Q86VP3 889 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 TRIM22Q8IYM9 498 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 CACNA2D3Q8IZS8 1091 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 DHX58Q96C10 678 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 MARCKSP29966 332 aaPredicted RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 HNRNPH1P31943 449 aaKnown RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 KIF5AQ12840 1032 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 CCDC96Q2M329 555 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 NAIF1Q69YI7 327 aaPredicted RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 ECHDC1Q9NTX5 307 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
CD28-202ENST00000374481 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.59□□□□□ -0.55
CD28-202ENST00000374481 DDX58O95786 925 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms