RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 ZSCAN25Q6NSZ9 544 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
PTPN20-204ENST00000374346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPN20-204ENST00000374346 FAM160A1Q05DH4 1040 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 ANO10Q9NW15 660 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 ME1P48163 572 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 TIMM10P62072 90 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 CCT2P78371 535 aaKnown RBP13.36□□□□□ -0.27
PTPN20-204ENST00000374346 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
PTPN20-204ENST00000374346 CCDC158Q5M9N0 1113 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 FBXL16Q8N461 479 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 MRFAP1L1Q96HT8 127 aa13.36□□□□□ -0.27
PTPN20-204ENST00000374346 RIOK3O14730 519 aaKnown RBP13.35□□□□□ -0.27
PTPN20-204ENST00000374346 CHGBP05060 677 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-204ENST00000374346 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
PTPN20-204ENST00000374346 AKAP2Q9Y2D5 859 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 ADAMTSL3P82987 1691 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 A0A1B0GUL7 405 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 GORABQ5T7V8 394 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
PTPN20-204ENST00000374346 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 SALL1Q9NSC2 1324 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 PDIA3P30101 505 aaKnown RBP13.34□□□□□ -0.27
PTPN20-204ENST00000374346 IMMTQ16891 758 aaKnown RBP13.34□□□□□ -0.27
PTPN20-204ENST00000374346 CEP57L1Q8IYX8 460 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 BCL2L12Q9HB09 334 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 MAST3O60307 1309 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 IQCB1Q15051 598 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 USP28Q96RU2 1077 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
PTPN20-204ENST00000374346 DCCP43146 1447 aa13.33□□□□□ -0.27
PTPN20-204ENST00000374346 SMTNL1A8MU46 457 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 FOSBP53539 338 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 ARID3AQ99856 593 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 NRBP1Q9UHY1 535 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 TNS3Q68CZ2 1445 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 CTIFO43310 598 aaKnown RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 LRMPQ12912 555 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 TTC39AQ5SRH9 613 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 PDCL2Q8N4E4 241 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 FSIP1Q8NA03 581 aa13.33□□□□□ -0.28
PTPN20-204ENST00000374346 MRPS27Q92552 414 aaKnown RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
PTPN20-204ENST00000374346 TNNT1P13805 278 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 EVCP57679 992 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
PTPN20-204ENST00000374346 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 CPDO75976 1380 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 A0A1W2PQ27 194 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 A0A1W2PQ64 194 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 A0A1W2PQD8 194 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 SYCP1Q15431 976 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 WASHC4Q2M389 1173 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 LRRC24Q50LG9 513 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 TTLL7Q6ZT98 887 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 TJP1Q07157 1748 aa13.32□□□□□ -0.28
PTPN20-204ENST00000374346 GLI3P10071 1580 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
PTPN20-204ENST00000374346 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 ZCRB1Q8TBF4 217 aaKnown RBP13.31□□□□□ -0.28
PTPN20-204ENST00000374346 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 CACTINQ8WUQ7 758 aaKnown RBP13.31□□□□□ -0.28
PTPN20-204ENST00000374346 TSC1Q92574 1164 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 C8orf76Q96K31 380 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 ZBTB3Q9H5J0 574 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 UBR2Q8IWV8 1755 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 CPLX1O14810 134 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 TPM4P67936 248 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
PTPN20-204ENST00000374346 STK38Q15208 465 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
PTPN20-204ENST00000374346 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms