RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 PIGBQ92521 554 aa13.8□□□□□ -0.2
PACSIN1-202ENST00000374043 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
PACSIN1-202ENST00000374043 METAP2P50579 478 aaKnown RBP eCLIP13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 CUL4AQ13619 759 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 ZNF445P59923 1031 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 HLFQ16534 295 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 FAM177A1Q8N128 213 aaPredicted RBP13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 KAZALD1Q96I82 304 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 NOL10Q9BSC4 688 aaKnown RBP13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 PDIA6Q15084 440 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
PACSIN1-202ENST00000374043 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 TTC6Q86TZ1 520 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 E7EWF7 191 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 PRDM1O75626 825 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 HSPD1P10809 573 aaKnown RBP13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 CYP7A1P22680 504 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 ARMT1Q9H993 441 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 TYRO3Q06418 890 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 NECTIN1Q15223 517 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 HAUS7Q99871 368 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 TRMT1Q9NXH9 659 aaKnown RBP13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
PACSIN1-202ENST00000374043 MBD4O95243 580 aa13.77□□□□□ -0.2
PACSIN1-202ENST00000374043 ATP2B2Q01814 1243 aa13.77□□□□□ -0.2
PACSIN1-202ENST00000374043 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.2
PACSIN1-202ENST00000374043 PHKBQ93100 1093 aa13.77□□□□□ -0.2
PACSIN1-202ENST00000374043 ZPR1O75312 459 aa13.77□□□□□ -0.21
PACSIN1-202ENST00000374043 IARSP41252 1262 aaKnown RBP13.77□□□□□ -0.21
PACSIN1-202ENST00000374043 MARCH6O60337 910 aa13.77□□□□□ -0.21
PACSIN1-202ENST00000374043 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
PACSIN1-202ENST00000374043 ALG1Q9BT22 464 aa13.77□□□□□ -0.21
PACSIN1-202ENST00000374043 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 GJB4Q9NTQ9 266 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 SERPINC1P01008 464 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 UTP14AQ9BVJ6 771 aaKnown RBP13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 PHKA1P46020 1223 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 MFSD6Q6ZSS7 791 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 CEP57L1Q8IYX8 460 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 SEC31BQ9NQW1 1179 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 CEMIPQ8WUJ3 1361 aa13.76□□□□□ -0.21
PACSIN1-202ENST00000374043 KLHL10Q6JEL2 608 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 LEO1Q8WVC0 666 aaPredicted RBP13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 OSBP2Q969R2 916 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 A0A0G2JLW4 131 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 MTX1Q13505 466 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 DDX19AQ9NUU7 478 aaKnown RBP13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 FGAP02671 866 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 CCDC152Q4G0S7 254 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 TM6SF1Q9BZW5 370 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 TMX4Q9H1E5 349 aaPredicted RBP13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 ZBTB43O43298 467 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 OLFM4Q6UX06 510 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 CCDC34Q96HJ3 373 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
PACSIN1-202ENST00000374043 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 M0R2C6 588 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 SCRN1Q12765 414 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 SPECC1Q5M775 1068 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 HELLSQ9NRZ9 838 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 ZFYP08048 801 aaPredicted RBP13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 AMOTL1Q8IY63 956 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 ZKSCAN5Q9Y2L8 839 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 PXDNQ92626 1479 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 CDKL5O76039 1030 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 BCAMP50895 628 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 SH3TC1Q8TE82 1336 aa13.74□□□□□ -0.21
PACSIN1-202ENST00000374043 NR1I2O75469 434 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 TTF1Q15361 905 aaPredicted RBP13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 TFCP2L1Q9NZI6 479 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 PTGS1P23219 599 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 APPBP2Q92624 585 aa13.73□□□□□ -0.21
PACSIN1-202ENST00000374043 PUS7LQ9H0K6 701 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms