RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ATP2B4P23634 1241 aa17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 OLFM4Q6UX06 510 aa17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 NLGN2Q8NFZ4 835 aa17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 FHDC1Q9C0D6 1143 aaPredicted RBP17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 DUOX1Q9NRD9 1551 aa17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 GGA1Q9UJY5 639 aa17.91■□□□□ 0.46
SMPDL3B-201ENST00000373888 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 GRIPAP1Q4V328 841 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 TSHZ3Q63HK5 1081 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 MPNDQ8N594 471 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
SMPDL3B-201ENST00000373888 ERC2O15083 957 aa17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 UFL1O94874 794 aa17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 GORABQ5T7V8 394 aa17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 TTC22Q5TAA0 569 aa17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 DPP8Q6V1X1 898 aaPredicted RBP17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 C15orf52Q6ZUT6 534 aaKnown RBP17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 POLLQ9UGP5 575 aa17.89■□□□□ 0.45
SMPDL3B-201ENST00000373888 C21orf2O43822 256 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 GLRX3O76003 335 aaKnown RBP17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 ATP5JP18859 108 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 CCDC158Q5M9N0 1113 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 KLRK1P26718 216 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 RTFDC1Q9BY42 306 aaPredicted RBP17.88■□□□□ 0.45
SMPDL3B-201ENST00000373888 MED23Q9ULK4 1368 aa17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 GSPT1P15170 499 aaKnown RBP17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 CAVIN4Q5BKX8 364 aa17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 FAM84BQ96KN1 310 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 SYT17Q9BSW7 474 aa17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 ZNF219Q9P2Y4 722 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3B-201ENST00000373888 C6orf229H3BNL8 230 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 ARID4AP29374 1257 aaPredicted RBP17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 PHKA1P46020 1223 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 GYG1P46976 350 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 BCAMP50895 628 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 TTC39AQ5SRH9 613 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 FBXO33Q7Z6M2 555 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 TXNRD3Q86VQ6 643 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 RTKN2Q8IZC4 609 aa17.86■□□□□ 0.45
SMPDL3B-201ENST00000373888 ZBTB22O15209 634 aa17.85■□□□□ 0.45
SMPDL3B-201ENST00000373888 UQCRFS1P1P0C7P4 283 aa17.85■□□□□ 0.45
SMPDL3B-201ENST00000373888 GPR101Q96P66 508 aaPredicted RBP17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 PSMD1Q99460 953 aa17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 EYA3Q99504 573 aa17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 BOLA2Q9H3K6 86 aa17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 BCS1LQ9Y276 419 aa17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
SMPDL3B-201ENST00000373888 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 VPS37DQ86XT2 251 aa17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 SUPT20HQ8NEM7 779 aa17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 HAUS7Q99871 368 aa17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 GNL3LQ9NVN8 582 aaKnown RBP17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 WWC3Q9ULE0 1092 aa17.83■□□□□ 0.45
SMPDL3B-201ENST00000373888 MCAMP43121 646 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 SEMA3EO15041 775 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 RASGRF1Q13972 1273 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 SCARF1Q14162 830 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 BACH2Q9BYV9 841 aa17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 ZC3H12CQ9C0D7 883 aaKnown RBP17.82■□□□□ 0.44
SMPDL3B-201ENST00000373888 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
SMPDL3B-201ENST00000373888 SDSP20132 328 aa17.81■□□□□ 0.44
SMPDL3B-201ENST00000373888 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
SMPDL3B-201ENST00000373888 FER1L6Q2WGJ9 1857 aa17.81■□□□□ 0.44
SMPDL3B-201ENST00000373888 PDS5AQ29RF7 1337 aaKnown RBP17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 IL1R1P14778 569 aa17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 SPATA5Q8NB90 893 aa17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 DNAJC2Q99543 621 aaKnown RBP17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 HMG20BQ9P0W2 317 aa17.8■□□□□ 0.44
SMPDL3B-201ENST00000373888 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 MAP4K4O95819 1239 aaPredicted RBP17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 KIAA2012Q0VF49 1180 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 PI16Q6UXB8 463 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 EVI5LQ96CN4 794 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 COA1Q9GZY4 146 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 CD209Q9NNX6 404 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 NDUFB9Q9Y6M9 179 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
SMPDL3B-201ENST00000373888 RIMBP2O15034 1052 aa17.78■□□□□ 0.44
SMPDL3B-201ENST00000373888 ZAP70P43403 619 aa17.78■□□□□ 0.44
SMPDL3B-201ENST00000373888 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
SMPDL3B-201ENST00000373888 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
SMPDL3B-201ENST00000373888 NFKBIEO00221 500 aa17.77■□□□□ 0.44
SMPDL3B-201ENST00000373888 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
SMPDL3B-201ENST00000373888 IQSEC3Q9UPP2 1182 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms