RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 INHBEP58166 350 aa19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 MKRN3Q13064 507 aaKnown RBP19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 CHMP4AQ9BY43 222 aa19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 CWC25Q9NXE8 425 aaPredicted RBP19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 ECM29Q5VYK3 1845 aa19.18■□□□□ 0.66
CDKN1A-202ENST00000373711 WNT10BO00744 389 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 RALBP1Q15311 655 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 STRIP1Q5VSL9 837 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 PRAMEF18Q5VWM3 479 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 FBXW7Q969H0 707 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 MYD88Q99836 296 aa19.17■□□□□ 0.66
CDKN1A-202ENST00000373711 MANSC4A6NHS7 340 aaPredicted RBP19.16■□□□□ 0.66
CDKN1A-202ENST00000373711 DDX58O95786 925 aaKnown RBP19.16■□□□□ 0.66
CDKN1A-202ENST00000373711 RUNDC1Q96C34 613 aa19.16■□□□□ 0.66
CDKN1A-202ENST00000373711 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
CDKN1A-202ENST00000373711 SCAF8Q9UPN6 1271 aaKnown RBP19.16■□□□□ 0.66
CDKN1A-202ENST00000373711 PTPN12Q05209 780 aaKnown RBP19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 HABP4Q5JVS0 413 aaKnown RBP19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 DACT2Q5SW24 774 aa19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 SPRYD7Q5W111 196 aa19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 CCDC85AQ96PX6 553 aaPredicted RBP19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 TRIM17Q9Y577 477 aa19.15■□□□□ 0.66
CDKN1A-202ENST00000373711 CCDC146Q8IYE0 955 aa19.14■□□□□ 0.65
CDKN1A-202ENST00000373711 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.65
CDKN1A-202ENST00000373711 ANGEL1Q9UNK9 670 aaKnown RBP19.14■□□□□ 0.65
CDKN1A-202ENST00000373711 TRIM35Q9UPQ4 493 aa19.14■□□□□ 0.65
CDKN1A-202ENST00000373711 SASH1O94885 1247 aa19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 ZBTB48P10074 688 aaPredicted RBP19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 CTSWP56202 376 aa19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 OTUD7BQ6GQQ9 843 aa19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 KIAA0100Q14667 2235 aaKnown RBP19.13■□□□□ 0.65
CDKN1A-202ENST00000373711 PPP1R12BO60237 982 aaPredicted RBP19.12■□□□□ 0.65
CDKN1A-202ENST00000373711 CCT4P50991 539 aaKnown RBP19.12■□□□□ 0.65
CDKN1A-202ENST00000373711 PRKG1Q13976 671 aa19.12■□□□□ 0.65
CDKN1A-202ENST00000373711 LDLRAD1Q5T700 205 aa19.12■□□□□ 0.65
CDKN1A-202ENST00000373711 SLC10A4Q96EP9 437 aa19.12■□□□□ 0.65
CDKN1A-202ENST00000373711 UNCXA6NJT0 531 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 OTOP1Q7RTM1 612 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 IFNL1Q8IU54 200 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 MINPP1Q9UNW1 487 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 LEMD3Q9Y2U8 911 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 PPP2R3BQ9Y5P8 575 aa19.11■□□□□ 0.65
CDKN1A-202ENST00000373711 IGHMBP2P38935 993 aaKnown RBP19.1■□□□□ 0.65
CDKN1A-202ENST00000373711 TTLL5Q6EMB2 1281 aa19.1■□□□□ 0.65
CDKN1A-202ENST00000373711 MBIPQ9NS73 344 aa19.1■□□□□ 0.65
CDKN1A-202ENST00000373711 NEXNQ0ZGT2 675 aa19.09■□□□□ 0.65
CDKN1A-202ENST00000373711 MAP3K11Q16584 847 aa19.09■□□□□ 0.65
CDKN1A-202ENST00000373711 MXD3Q9BW11 206 aa19.09■□□□□ 0.65
CDKN1A-202ENST00000373711 R3HDMLQ9H3Y0 253 aa19.09■□□□□ 0.65
CDKN1A-202ENST00000373711 MYO1BO43795 1136 aa19.08■□□□□ 0.64
CDKN1A-202ENST00000373711 KIAA0825Q8IV33 1275 aa19.08■□□□□ 0.64
CDKN1A-202ENST00000373711 ANKRD2Q9GZV1 360 aa19.08■□□□□ 0.64
CDKN1A-202ENST00000373711 HTTP42858 3142 aa19.08■□□□□ 0.64
CDKN1A-202ENST00000373711 MKI67P46013 3256 aaKnown RBP19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 MYBBP1AQ9BQG0 1328 aaKnown RBP19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 GNAI1P63096 354 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 ARHGEF6Q15052 776 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 DLGAP5Q15398 846 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 SUPT20HL1Q3ZLR7 823 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 TTLL11Q8NHH1 800 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 WNK4Q96J92 1243 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 DEFB129Q9H1M3 183 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 PTPN22Q9Y2R2 807 aa19.07■□□□□ 0.64
CDKN1A-202ENST00000373711 ZNF804BA4D1E1 1349 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 POTEFA5A3E0 1075 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 KCNJ4P48050 445 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 IREB2P48200 963 aaKnown RBP19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 ZBED3Q96IU2 234 aaPredicted RBP19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 TMEM106CQ9BVX2 250 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 GREM2Q9H772 168 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 EFCC1Q9HA90 598 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 MAP3K2Q9Y2U5 619 aa19.06■□□□□ 0.64
CDKN1A-202ENST00000373711 ARMC5Q96C12 935 aa19.05■□□□□ 0.64
CDKN1A-202ENST00000373711 MPHOSPH8Q99549 860 aa19.05■□□□□ 0.64
CDKN1A-202ENST00000373711 CENPFP49454 3210 aa19.04■□□□□ 0.64
CDKN1A-202ENST00000373711 ZNF853P0CG23 659 aa19.04■□□□□ 0.64
CDKN1A-202ENST00000373711 GTF2IP78347 998 aa19.04■□□□□ 0.64
CDKN1A-202ENST00000373711 MTMR14Q8NCE2 650 aa19.04■□□□□ 0.64
CDKN1A-202ENST00000373711 IGF2BP3O00425 579 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 ELL2O00472 640 aaPredicted RBP19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 SP3Q02447 781 aa19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 KSR2Q6VAB6 950 aa19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 NBPF11Q86T75 865 aa19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
CDKN1A-202ENST00000373711 CRHR2Q13324 411 aa19.02■□□□□ 0.64
CDKN1A-202ENST00000373711 TXNRD3Q86VQ6 643 aa19.02■□□□□ 0.64
CDKN1A-202ENST00000373711 ANKRD13AQ8IZ07 590 aa19.02■□□□□ 0.64
CDKN1A-202ENST00000373711 OTOFQ9HC10 1997 aa19.02■□□□□ 0.64
CDKN1A-202ENST00000373711 SSC5DA1L4H1 1573 aa19.02■□□□□ 0.63
CDKN1A-202ENST00000373711 WTIPA6NIX2 430 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms