RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SNAP23O00161 211 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 EYA2O00167 538 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 EPS15P42566 896 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
HDAC8-201ENST00000373554 MTX1Q13505 466 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 UBE4AQ14139 1066 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 C15orf52Q6ZUT6 534 aaKnown RBP14.98□□□□□ -0.01
HDAC8-201ENST00000373554 ZNF804AQ7Z570 1209 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 TXNRD3Q86VQ6 643 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.98□□□□□ -0.01
HDAC8-201ENST00000373554 KCNQ5Q9NR82 932 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
HDAC8-201ENST00000373554 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
HDAC8-201ENST00000373554 SCN9AQ15858 1988 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 USP17L3A6NCW0 530 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 USP17L4A6NCW7 530 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 SRGAP3O43295 1099 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 POTEJP0CG39 1038 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 USP17L1Q7RTZ2 530 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 MICALL2Q8IY33 904 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 PANK1Q8TE04 598 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 DPF2Q92785 391 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 SIL1Q9H173 461 aa14.97□□□□□ -0.01
HDAC8-201ENST00000373554 ADARB2Q9NS39 739 aaKnown RBP14.97□□□□□ -0.01
HDAC8-201ENST00000373554 PSME4Q14997 1843 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 IRS2Q9Y4H2 1338 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 ADAMTSL1Q8N6G6 1762 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 H7C1D1 291 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 ZNF609O15014 1411 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 CIAO1O76071 339 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 PDE8BO95263 885 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 VIL1P09327 827 aaKnown RBP14.96□□□□□ -0.01
HDAC8-201ENST00000373554 HSPA6P17066 643 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 RSBN1LQ6PCB5 846 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-201ENST00000373554 USP50Q70EL3 339 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-201ENST00000373554 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 CD209Q9NNX6 404 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
HDAC8-201ENST00000373554 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
HDAC8-201ENST00000373554 MYO3BQ8WXR4 1341 aa14.95□□□□□ -0.02
HDAC8-201ENST00000373554 PUM3Q15397 648 aaKnown RBP14.95□□□□□ -0.02
HDAC8-201ENST00000373554 STRIP1Q5VSL9 837 aa14.95□□□□□ -0.02
HDAC8-201ENST00000373554 VGLL2Q8N8G2 317 aa14.95□□□□□ -0.02
HDAC8-201ENST00000373554 AGBL3Q8NEM8 1001 aa14.95□□□□□ -0.02
HDAC8-201ENST00000373554 COPRSQ9NQ92 184 aa14.95□□□□□ -0.02
HDAC8-201ENST00000373554 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-201ENST00000373554 IL15P40933 162 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-201ENST00000373554 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
HDAC8-201ENST00000373554 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
HDAC8-201ENST00000373554 PA2G4Q9UQ80 394 aaKnown RBP14.94□□□□□ -0.02
HDAC8-201ENST00000373554 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
HDAC8-201ENST00000373554 IL1R1P14778 569 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 HIBADHP31937 336 aaKnown RBP14.93□□□□□ -0.02
HDAC8-201ENST00000373554 GTF2IP78347 998 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 CAVIN4Q5BKX8 364 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 DACT2Q5SW24 774 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 TTLL5Q6EMB2 1281 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 VPS37DQ86XT2 251 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 C1orf115Q9H7X2 142 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 CEP126Q9P2H0 1117 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 DDX19BQ9UMR2 479 aa14.93□□□□□ -0.02
HDAC8-201ENST00000373554 PNMA6EA0A0J9YXQ4 647 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 SHTN1A0MZ66 631 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 SLC5A1P13866 664 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 GYG1P46976 350 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 APLP1P51693 650 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 TRPM4Q8TD43 1214 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 LPIN2Q92539 896 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
HDAC8-201ENST00000373554 COG6Q9Y2V7 657 aa14.92□□□□□ -0.02
HDAC8-201ENST00000373554 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
HDAC8-201ENST00000373554 FGFR2P21802 821 aa14.91□□□□□ -0.02
HDAC8-201ENST00000373554 TBC1D10BQ4KMP7 808 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-201ENST00000373554 MAP1SQ66K74 1059 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-201ENST00000373554 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
HDAC8-201ENST00000373554 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
HDAC8-201ENST00000373554 FAM84BQ96KN1 310 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-201ENST00000373554 GMLQ99445 158 aa14.91□□□□□ -0.02
HDAC8-201ENST00000373554 ZNF646O15015 1829 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-201ENST00000373554 ZNF280AP59817 542 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-201ENST00000373554 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
HDAC8-201ENST00000373554 ATP2B3Q16720 1220 aa14.9□□□□□ -0.02
HDAC8-201ENST00000373554 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
HDAC8-201ENST00000373554 COL13A1Q5TAT6 717 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-201ENST00000373554 CNTROBQ8N137 903 aa14.9□□□□□ -0.02
HDAC8-201ENST00000373554 ZC3H15Q8WU90 426 aaKnown RBP14.9□□□□□ -0.02
HDAC8-201ENST00000373554 MXD3Q9BW11 206 aa14.9□□□□□ -0.02
HDAC8-201ENST00000373554 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-201ENST00000373554 SASH1O94885 1247 aa14.89□□□□□ -0.03
HDAC8-201ENST00000373554 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
HDAC8-201ENST00000373554 POLA2Q14181 598 aa14.89□□□□□ -0.03
HDAC8-201ENST00000373554 RBM26Q5T8P6 1007 aaKnown RBP14.89□□□□□ -0.03
HDAC8-201ENST00000373554 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
HDAC8-201ENST00000373554 TDRD7Q8NHU6 1098 aaKnown RBP14.89□□□□□ -0.03
HDAC8-201ENST00000373554 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
HDAC8-201ENST00000373554 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
HDAC8-201ENST00000373554 EGFRP00533 1210 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms