RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 MED23Q9ULK4 1368 aa25.15■■□□□ 1.62
SYNC-201ENST00000373484 ATG9AQ7Z3C6 839 aa25.14■■□□□ 1.62
SYNC-201ENST00000373484 RIMBP2O15034 1052 aa25.14■■□□□ 1.61
SYNC-201ENST00000373484 NIM1KQ8IY84 436 aa25.14■■□□□ 1.61
SYNC-201ENST00000373484 ZC3H12CQ9C0D7 883 aaKnown RBP25.14■■□□□ 1.61
SYNC-201ENST00000373484 FZD9O00144 591 aa25.13■■□□□ 1.61
SYNC-201ENST00000373484 METTL24Q5JXM2 366 aa25.13■■□□□ 1.61
SYNC-201ENST00000373484 VGLL2Q8N8G2 317 aa25.13■■□□□ 1.61
SYNC-201ENST00000373484 PSME4Q14997 1843 aa25.13■■□□□ 1.61
SYNC-201ENST00000373484 KCNJ4P48050 445 aa25.12■■□□□ 1.61
SYNC-201ENST00000373484 SCN9AQ15858 1988 aa25.12■■□□□ 1.61
SYNC-201ENST00000373484 SNAP23O00161 211 aa25.12■■□□□ 1.61
SYNC-201ENST00000373484 IL15P40933 162 aaPredicted RBP25.11■■□□□ 1.61
SYNC-201ENST00000373484 RPAP2Q8IXW5 612 aaPredicted RBP25.11■■□□□ 1.61
SYNC-201ENST00000373484 IRS2Q9Y4H2 1338 aa25.1■■□□□ 1.61
SYNC-201ENST00000373484 PDE8BO95263 885 aa25.1■■□□□ 1.61
SYNC-201ENST00000373484 UBE4AQ14139 1066 aa25.1■■□□□ 1.61
SYNC-201ENST00000373484 C15orf52Q6ZUT6 534 aaKnown RBP25.09■■□□□ 1.61
SYNC-201ENST00000373484 ZNRF3Q9ULT6 936 aa25.09■■□□□ 1.61
SYNC-201ENST00000373484 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
SYNC-201ENST00000373484 FRAT2O75474 233 aaPredicted RBP25.09■■□□□ 1.61
SYNC-201ENST00000373484 KLRK1P26718 216 aa25.09■■□□□ 1.61
SYNC-201ENST00000373484 TXNRD3Q86VQ6 643 aa25.09■■□□□ 1.61
SYNC-201ENST00000373484 DBNDD1Q9H9R9 158 aa25.09■■□□□ 1.61
SYNC-201ENST00000373484 UPF2Q9HAU5 1272 aaKnown RBP25.09■■□□□ 1.61
SYNC-201ENST00000373484 GLTPD2A6NH11 291 aa25.08■■□□□ 1.61
SYNC-201ENST00000373484 DOK7Q18PE1 504 aa25.08■■□□□ 1.61
SYNC-201ENST00000373484 WDR90Q96KV7 1748 aa25.08■■□□□ 1.6
SYNC-201ENST00000373484 YDJCA8MPS7 323 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 ECE2O60344 883 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 SIRT2Q8IXJ6 389 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 ZNF646O15015 1829 aaPredicted RBP25.07■■□□□ 1.6
SYNC-201ENST00000373484 ARAP2Q8WZ64 1704 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 EIF6P56537 245 aaKnown RBP25.07■■□□□ 1.6
SYNC-201ENST00000373484 DPY19L2Q6NUT2 758 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 CEP126Q9P2H0 1117 aa25.07■■□□□ 1.6
SYNC-201ENST00000373484 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
SYNC-201ENST00000373484 FGFR2P21802 821 aa25.05■■□□□ 1.6
SYNC-201ENST00000373484 G3BP1Q13283 466 aaKnown RBP eCLIP25.05■■□□□ 1.6
SYNC-201ENST00000373484 PUM3Q15397 648 aaKnown RBP25.05■■□□□ 1.6
SYNC-201ENST00000373484 RWDD1Q9H446 243 aaPredicted RBP25.05■■□□□ 1.6
SYNC-201ENST00000373484 G3V3G9 751 aa25.05■■□□□ 1.6
SYNC-201ENST00000373484 DCAF8Q5TAQ9 597 aa25.05■■□□□ 1.6
SYNC-201ENST00000373484 HMMRO75330 724 aa25.04■■□□□ 1.6
SYNC-201ENST00000373484 SURF6O75683 361 aaKnown RBP25.04■■□□□ 1.6
SYNC-201ENST00000373484 CXCL9Q07325 125 aa25.04■■□□□ 1.6
SYNC-201ENST00000373484 ZNF526Q8TF50 670 aaPredicted RBP25.04■■□□□ 1.6
SYNC-201ENST00000373484 COA1Q9GZY4 146 aa25.04■■□□□ 1.6
SYNC-201ENST00000373484 BRPF3Q9ULD4 1205 aa25.04■■□□□ 1.6
SYNC-201ENST00000373484 DDNO94850 711 aaPredicted RBP25.03■■□□□ 1.6
SYNC-201ENST00000373484 PODNQ7Z5L7 613 aa25.03■■□□□ 1.6
SYNC-201ENST00000373484 TBC1D32Q96NH3 1257 aa25.03■■□□□ 1.6
SYNC-201ENST00000373484 SCN4AP35499 1836 aa25.03■■□□□ 1.6
SYNC-201ENST00000373484 GPC2Q8N158 579 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 MYH13Q9UKX3 1938 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 SASH1O94885 1247 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 TFCP2Q12800 502 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 CIAPIN1Q6FI81 312 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 LPIN2Q92539 896 aa25.02■■□□□ 1.6
SYNC-201ENST00000373484 RAD17O75943 681 aa25.01■■□□□ 1.59
SYNC-201ENST00000373484 ZNF804AQ7Z570 1209 aa25.01■■□□□ 1.59
SYNC-201ENST00000373484 KCNQ5Q9NR82 932 aa25.01■■□□□ 1.59
SYNC-201ENST00000373484 IFIT1P09914 478 aaKnown RBP25■■□□□ 1.59
SYNC-201ENST00000373484 ATP2B3Q16720 1220 aa25■■□□□ 1.59
SYNC-201ENST00000373484 FAM43AQ8N2R8 423 aa25■■□□□ 1.59
SYNC-201ENST00000373484 FAM84BQ96KN1 310 aaPredicted RBP25■■□□□ 1.59
SYNC-201ENST00000373484 GPBP1L1Q9HC44 474 aaPredicted RBP25■■□□□ 1.59
SYNC-201ENST00000373484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25■■□□□ 1.59
SYNC-201ENST00000373484 SLC5A1P13866 664 aa25■■□□□ 1.59
SYNC-201ENST00000373484 OS9Q13438 667 aaPredicted RBP25■■□□□ 1.59
SYNC-201ENST00000373484 TNIP1Q15025 636 aa25■■□□□ 1.59
SYNC-201ENST00000373484 ANTXR1Q9H6X2 564 aa25■■□□□ 1.59
SYNC-201ENST00000373484 CD209Q9NNX6 404 aa25■■□□□ 1.59
SYNC-201ENST00000373484 PCDHB15Q9Y5E8 787 aa25■■□□□ 1.59
SYNC-201ENST00000373484 GJA3Q9Y6H8 435 aa25■■□□□ 1.59
SYNC-201ENST00000373484 GYG1P46976 350 aa24.99■■□□□ 1.59
SYNC-201ENST00000373484 L3MBTL3Q96JM7 780 aaPredicted RBP24.99■■□□□ 1.59
SYNC-201ENST00000373484 EXOC6BQ9Y2D4 811 aa24.99■■□□□ 1.59
SYNC-201ENST00000373484 AKAP2Q9Y2D5 859 aa24.98■■□□□ 1.59
SYNC-201ENST00000373484 ZNF609O15014 1411 aa24.98■■□□□ 1.59
SYNC-201ENST00000373484 PSMD14O00487 310 aa24.98■■□□□ 1.59
SYNC-201ENST00000373484 IL1R1P14778 569 aa24.98■■□□□ 1.59
SYNC-201ENST00000373484 HIBADHP31937 336 aaKnown RBP24.98■■□□□ 1.59
SYNC-201ENST00000373484 L1TD1Q5T7N2 865 aaKnown RBP24.98■■□□□ 1.59
SYNC-201ENST00000373484 FBXO33Q7Z6M2 555 aa24.98■■□□□ 1.59
SYNC-201ENST00000373484 HSP90AB4PQ58FF6 505 aa24.97■■□□□ 1.59
SYNC-201ENST00000373484 CAVIN4Q5BKX8 364 aa24.97■■□□□ 1.59
SYNC-201ENST00000373484 NMRK2Q9NPI5 230 aa24.97■■□□□ 1.59
SYNC-201ENST00000373484 A0A1B0GUL7 405 aa24.96■■□□□ 1.59
SYNC-201ENST00000373484 POTECB2RU33 542 aa24.96■■□□□ 1.59
SYNC-201ENST00000373484 ERC1Q8IUD2 1116 aa24.96■■□□□ 1.59
SYNC-201ENST00000373484 USP17L3A6NCW0 530 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 USP17L4A6NCW7 530 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 SEC24BO95487 1268 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 VIL1P09327 827 aaKnown RBP24.95■■□□□ 1.58
SYNC-201ENST00000373484 TIMM10P62072 90 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 USP17L1Q7RTZ2 530 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 TDRD7Q8NHU6 1098 aaKnown RBP24.95■■□□□ 1.58
SYNC-201ENST00000373484 RRAGCQ9HB90 399 aa24.95■■□□□ 1.58
SYNC-201ENST00000373484 GPR108Q9NPR9 543 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms