RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 RRP12Q5JTH9 1297 aaKnown RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 VPS36Q86VN1 386 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 ZGPATQ8N5A5 531 aaKnown RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 USO1O60763 962 aaKnown RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 YEATS4O95619 227 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 FOSBP53539 338 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
PGK1-201ENST00000373316 ARID3AQ99856 593 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
PGK1-201ENST00000373316 F13A1P00488 732 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 CASQ1P31415 396 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 SEC63Q9UGP8 760 aaKnown RBP12.23□□□□□ -0.45
PGK1-201ENST00000373316 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 SPA17Q15506 151 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 TAF4BQ92750 862 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 HELLSQ9NRZ9 838 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.23□□□□□ -0.456e-21■□□□□ 8.1
PGK1-201ENST00000373316 GRM8O00222 908 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 KIAA0754O94854 1291 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 CWF19L2Q2TBE0 894 aaKnown RBP12.23□□□□□ -0.45
PGK1-201ENST00000373316 SLIT3O75094 1523 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 KCNQ4P56696 695 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 RAI14Q9P0K7 980 aa12.23□□□□□ -0.45
PGK1-201ENST00000373316 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 RTL9Q8NET4 1388 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 DESP17661 470 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 FMNL3Q8IVF7 1028 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 ACSBG1Q96GR2 724 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 BOLA2Q9H3K6 86 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 ZKSCAN5Q9Y2L8 839 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 DDX12PQ92771 950 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 MAP4K4O95819 1239 aaPredicted RBP12.22□□□□□ -0.45
PGK1-201ENST00000373316 IARSP41252 1262 aaKnown RBP12.22□□□□□ -0.45
PGK1-201ENST00000373316 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 FSIP1Q8NA03 581 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 USP26Q9BXU7 913 aa12.22□□□□□ -0.45
PGK1-201ENST00000373316 TNIP1Q15025 636 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 CETN2P41208 172 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 PPP2R5BQ15173 497 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 NUP133Q8WUM0 1156 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
PGK1-201ENST00000373316 ABCC4O15439 1325 aa12.21□□□□□ -0.45
PGK1-201ENST00000373316 ADCY5O95622 1261 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 POTEJP0CG39 1038 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.46
PGK1-201ENST00000373316 NAP1L4Q99733 375 aaKnown RBP12.21□□□□□ -0.46
PGK1-201ENST00000373316 RGS12O14924 1447 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 KDM6AO15550 1401 aaPredicted RBP12.21□□□□□ -0.46
PGK1-201ENST00000373316 ZNF445P59923 1031 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.46
PGK1-201ENST00000373316 BMS1Q14692 1282 aaKnown RBP12.21□□□□□ -0.46
PGK1-201ENST00000373316 STXBP4Q6ZWJ1 553 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 SMIM5Q71RC9 77 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 CNNM3Q8NE01 707 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.46
PGK1-201ENST00000373316 DCCP43146 1447 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 ZNF165P49910 485 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 EIF5P55010 431 aaKnown RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 CEBPZQ03701 1054 aaKnown RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 NBPF7P0C2Y1 421 aaPredicted RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 PDE4BQ07343 736 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 C8orf37Q96NL8 207 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 WWC2Q6AWC2 1192 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 MICALCLQ6ZW33 695 aa12.2□□□□□ -0.46
PGK1-201ENST00000373316 MRPS27Q92552 414 aaKnown RBP12.2□□□□□ -0.46
PGK1-201ENST00000373316 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 GIGYF1O75420 1035 aaPredicted RBP12.19□□□□□ -0.46
PGK1-201ENST00000373316 TNNT1P13805 278 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
PGK1-201ENST00000373316 FBXW7Q969H0 707 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 ALS2CR12Q96Q35 445 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 ATP5J2-PTCD1G3V325 749 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 H0YHG0 523 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 POLR3GO15318 223 aaPredicted RBP12.19□□□□□ -0.46
PGK1-201ENST00000373316 BAG3O95817 575 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 CCDC172P0C7W6 258 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
PGK1-201ENST00000373316 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
PGK1-201ENST00000373316 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
PGK1-201ENST00000373316 CHMLP26374 656 aa12.18□□□□□ -0.46
PGK1-201ENST00000373316 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms