RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 HAUS7Q99871 368 aa22.36■■□□□ 1.17
VEGFA-206ENST00000372077 TBC1D9Q6ZT07 1266 aa22.35■■□□□ 1.17
VEGFA-206ENST00000372077 C2CD5Q86YS7 1000 aa22.35■■□□□ 1.17
VEGFA-206ENST00000372077 STYK1Q6J9G0 422 aa22.35■■□□□ 1.17
VEGFA-206ENST00000372077 PKNOX2Q96KN3 472 aa22.35■■□□□ 1.17
VEGFA-206ENST00000372077 H0YIN7 160 aa22.35■■□□□ 1.17
VEGFA-206ENST00000372077 TTC39AQ5SRH9 613 aa22.34■■□□□ 1.17
VEGFA-206ENST00000372077 EVI5LQ96CN4 794 aa22.34■■□□□ 1.17
VEGFA-206ENST00000372077 LRRC37AA6NMS7 1700 aa22.33■■□□□ 1.17
VEGFA-206ENST00000372077 SP8Q8IXZ3 490 aa22.33■■□□□ 1.17
VEGFA-206ENST00000372077 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-206ENST00000372077 CCDC102BQ68D86 513 aa22.33■■□□□ 1.16
VEGFA-206ENST00000372077 WTIPA6NIX2 430 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-206ENST00000372077 SLC51AQ86UW1 340 aa22.32■■□□□ 1.16
VEGFA-206ENST00000372077 XDHP47989 1333 aa22.32■■□□□ 1.16
VEGFA-206ENST00000372077 AK9Q5TCS8 1911 aa22.32■■□□□ 1.16
VEGFA-206ENST00000372077 PPEF1O14829 653 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-206ENST00000372077 ARID4AP29374 1257 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-206ENST00000372077 LEMD3Q9Y2U8 911 aa22.32■■□□□ 1.16
VEGFA-206ENST00000372077 KIF13BQ9NQT8 1826 aa22.32■■□□□ 1.16
VEGFA-206ENST00000372077 PHKA1P46020 1223 aa22.31■■□□□ 1.16
VEGFA-206ENST00000372077 ATP6V0A2Q9Y487 856 aa22.31■■□□□ 1.16
VEGFA-206ENST00000372077 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-206ENST00000372077 POLD1P28340 1107 aa22.31■■□□□ 1.16
VEGFA-206ENST00000372077 SGIP1Q9BQI5 828 aa22.31■■□□□ 1.16
VEGFA-206ENST00000372077 ZNF804BA4D1E1 1349 aa22.31■■□□□ 1.16
VEGFA-206ENST00000372077 UQCRFS1P1P0C7P4 283 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 PODXL2Q9NZ53 605 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 IRS2Q9Y4H2 1338 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 CHMLP26374 656 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 CHRNA5P30532 468 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 GPSM2P81274 684 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 ZNF622Q969S3 477 aaKnown RBP eCLIP22.3■■□□□ 1.163e-13■□□□□ 10.3
VEGFA-206ENST00000372077 SCARF1Q14162 830 aa22.3■■□□□ 1.16
VEGFA-206ENST00000372077 KCNJ4P48050 445 aa22.29■■□□□ 1.16
VEGFA-206ENST00000372077 EDC3Q96F86 508 aaKnown RBP22.29■■□□□ 1.16
VEGFA-206ENST00000372077 DNAJC2Q99543 621 aaKnown RBP22.29■■□□□ 1.16
VEGFA-206ENST00000372077 ANKIB1Q9P2G1 1089 aa22.29■■□□□ 1.16
VEGFA-206ENST00000372077 CASC1Q6TDU7 716 aa22.29■■□□□ 1.16
VEGFA-206ENST00000372077 NDUFB9Q9Y6M9 179 aa22.29■■□□□ 1.16
VEGFA-206ENST00000372077 AKAP11Q9UKA4 1901 aa22.29■■□□□ 1.16
VEGFA-206ENST00000372077 MCAMP43121 646 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 BCAMP50895 628 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 CNKSR1Q969H4 720 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 DLEC1Q9Y238 1755 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 C15orf52Q6ZUT6 534 aaKnown RBP22.28■■□□□ 1.16
VEGFA-206ENST00000372077 FAM84BQ96KN1 310 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-206ENST00000372077 ANTXR1Q9H6X2 564 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 PAG1Q9NWQ8 432 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 LTBP1Q14766 1721 aa22.28■■□□□ 1.16
VEGFA-206ENST00000372077 ATP2B4P23634 1241 aa22.27■■□□□ 1.16
VEGFA-206ENST00000372077 FBXO33Q7Z6M2 555 aa22.27■■□□□ 1.16
VEGFA-206ENST00000372077 NSFL1CQ9UNZ2 370 aaKnown RBP22.27■■□□□ 1.16
VEGFA-206ENST00000372077 ZBTB22O15209 634 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 TICAM2Q86XR7 235 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 GYG1P46976 350 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 CAVIN4Q5BKX8 364 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 KBTBD3Q8NAB2 608 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 RFX7Q2KHR2 1363 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 GOLIM4O00461 696 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 KLRK1P26718 216 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 ZAP70P43403 619 aa22.26■■□□□ 1.15
VEGFA-206ENST00000372077 PTGER2P43116 358 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 PRPF40BQ6NWY9 871 aaKnown RBP22.25■■□□□ 1.15
VEGFA-206ENST00000372077 SNRKQ9NRH2 765 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 GGA1Q9UJY5 639 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 FKBP4Q02790 459 aaKnown RBP eCLIP22.25■■□□□ 1.15
VEGFA-206ENST00000372077 FSD1Q9BTV5 496 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 HMG20BQ9P0W2 317 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 SLX4Q8IY92 1834 aa22.25■■□□□ 1.15
VEGFA-206ENST00000372077 KCNA3P22001 575 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 TGFB2P61812 414 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 ESYT1Q9BSJ8 1104 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 CACNA1SQ13698 1873 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 HIP1O00291 1037 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 RASGRF1Q13972 1273 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 PI16Q6UXB8 463 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 TBC1D16Q8TBP0 767 aa22.24■■□□□ 1.15
VEGFA-206ENST00000372077 KIAA1551Q9HCM1 1747 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 TXNRD3Q86VQ6 643 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 C7orf43Q8WVR3 580 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 GNL3LQ9NVN8 582 aaKnown RBP22.23■■□□□ 1.15
VEGFA-206ENST00000372077 UFL1O94874 794 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 CD2BP2O95400 341 aaKnown RBP22.23■■□□□ 1.15
VEGFA-206ENST00000372077 DPEP1P16444 411 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 SPATA5Q8NB90 893 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 PANK2Q9BZ23 570 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 POLLQ9UGP5 575 aa22.23■■□□□ 1.15
VEGFA-206ENST00000372077 HIBADHP31937 336 aaKnown RBP22.22■■□□□ 1.15
VEGFA-206ENST00000372077 CYP2E1P05181 493 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-206ENST00000372077 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 MPNDQ8N594 471 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 DIAPH3Q9NSV4 1193 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 A0A0G2JLW4 131 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 SEMA3EO15041 775 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 TMX4Q9H1E5 349 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-206ENST00000372077 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 TTF1Q15361 905 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-206ENST00000372077 VPS37DQ86XT2 251 aa22.21■■□□□ 1.15
VEGFA-206ENST00000372077 HSP90AA1P07900 732 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms