RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 METTL24Q5JXM2 366 aa24.35■■□□□ 1.49
VEGFA-204ENST00000372064 SMARCC2Q8TAQ2 1214 aa24.35■■□□□ 1.49
VEGFA-204ENST00000372064 TRMT112Q9UI30 125 aaKnown RBP24.35■■□□□ 1.49
VEGFA-204ENST00000372064 SCRN1Q12765 414 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 E7EWF7 191 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 ZFYP08048 801 aaPredicted RBP24.34■■□□□ 1.49
VEGFA-204ENST00000372064 ZAP70P43403 619 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 FGD1P98174 961 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 PI16Q6UXB8 463 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 DZIP3Q86Y13 1208 aaKnown RBP24.34■■□□□ 1.49
VEGFA-204ENST00000372064 ATP2B3Q16720 1220 aa24.34■■□□□ 1.49
VEGFA-204ENST00000372064 TTLL5Q6EMB2 1281 aa24.33■■□□□ 1.48
VEGFA-204ENST00000372064 SCAND2PQ9GZW5 306 aaPredicted RBP24.33■■□□□ 1.48
VEGFA-204ENST00000372064 MYH3P11055 1940 aa24.32■■□□□ 1.48
VEGFA-204ENST00000372064 ANKRD18BA2A2Z9 1011 aa24.32■■□□□ 1.48
VEGFA-204ENST00000372064 IL6STP40189 918 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-204ENST00000372064 WASHC4Q2M389 1173 aa24.32■■□□□ 1.48
VEGFA-204ENST00000372064 CNNM1Q9NRU3 951 aa24.32■■□□□ 1.48
VEGFA-204ENST00000372064 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.32■■□□□ 1.48
VEGFA-204ENST00000372064 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
VEGFA-204ENST00000372064 ADAMTS2O95450 1211 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 MSNP26038 577 aaKnown RBP24.31■■□□□ 1.48
VEGFA-204ENST00000372064 FBXL16Q8N461 479 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 UBN2Q6ZU65 1347 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-204ENST00000372064 A0A0G2JS52 829 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 RESTQ13127 1097 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-204ENST00000372064 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-204ENST00000372064 FOXP2O15409 715 aa24.31■■□□□ 1.48
VEGFA-204ENST00000372064 NUP98P52948 1817 aa24.3■■□□□ 1.48
VEGFA-204ENST00000372064 ERVV-1B6SEH8 477 aa24.3■■□□□ 1.48
VEGFA-204ENST00000372064 CCDC39Q9UFE4 941 aa24.3■■□□□ 1.48
VEGFA-204ENST00000372064 APOBRQ0VD83 1088 aa24.3■■□□□ 1.48
VEGFA-204ENST00000372064 DDX11Q96FC9 970 aa24.3■■□□□ 1.48
VEGFA-204ENST00000372064 ZNF512BQ96KM6 892 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-204ENST00000372064 NSUN7Q8NE18 718 aaKnown RBP24.29■■□□□ 1.48
VEGFA-204ENST00000372064 PDE8AO60658 829 aa24.29■■□□□ 1.48
VEGFA-204ENST00000372064 VGLL2Q8N8G2 317 aa24.29■■□□□ 1.48
VEGFA-204ENST00000372064 CTDNEP1O95476 244 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 MCAMP43121 646 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 GIMAP6Q6P9H5 292 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 CHST3Q7LGC8 479 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 ZSCAN16Q9H4T2 348 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-204ENST00000372064 CTNNA3Q9UI47 895 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 MYH7P12883 1935 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 LRP5O75197 1615 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-204ENST00000372064 ZNF34Q8IZ26 560 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 LEO1Q8WVC0 666 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-204ENST00000372064 APPBP2Q92624 585 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 PUS7LQ9H0K6 701 aaKnown RBP24.28■■□□□ 1.48
VEGFA-204ENST00000372064 DOT1LQ8TEK3 1739 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 MCM5P33992 734 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 ZNF274Q96GC6 653 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-204ENST00000372064 ACSBG1Q96GR2 724 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 ZKSCAN5Q9Y2L8 839 aa24.28■■□□□ 1.48
VEGFA-204ENST00000372064 AKAP11Q9UKA4 1901 aa24.27■■□□□ 1.48
VEGFA-204ENST00000372064 SALL1Q9NSC2 1324 aa24.27■■□□□ 1.48
VEGFA-204ENST00000372064 ZNF500O60304 480 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-204ENST00000372064 HMGN5P82970 282 aaKnown RBP24.27■■□□□ 1.48
VEGFA-204ENST00000372064 DDB1Q16531 1140 aa24.27■■□□□ 1.48
VEGFA-204ENST00000372064 TFIP11Q9UBB9 837 aaKnown RBP24.27■■□□□ 1.48
VEGFA-204ENST00000372064 SPATA31A1Q5TZJ5 1347 aa24.27■■□□□ 1.47
VEGFA-204ENST00000372064 EVCP57679 992 aa24.26■■□□□ 1.47
VEGFA-204ENST00000372064 NAA16Q6N069 864 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-204ENST00000372064 EIF5P55010 431 aaKnown RBP24.26■■□□□ 1.47
VEGFA-204ENST00000372064 HAND2P61296 217 aa24.26■■□□□ 1.47
VEGFA-204ENST00000372064 H3BQV1 296 aa24.25■■□□□ 1.47
VEGFA-204ENST00000372064 IFFO2Q5TF58 517 aa24.25■■□□□ 1.47
VEGFA-204ENST00000372064 PDE8BO95263 885 aa24.25■■□□□ 1.47
VEGFA-204ENST00000372064 LIG1P18858 919 aa24.25■■□□□ 1.47
VEGFA-204ENST00000372064 PDIA3P30101 505 aaKnown RBP24.25■■□□□ 1.47
VEGFA-204ENST00000372064 CCT2P78371 535 aaKnown RBP24.25■■□□□ 1.47
VEGFA-204ENST00000372064 INTS5Q6P9B9 1019 aaKnown RBP24.25■■□□□ 1.47
VEGFA-204ENST00000372064 DDX60Q8IY21 1712 aaKnown RBP24.25■■□□□ 1.47
VEGFA-204ENST00000372064 PTPDC1A2A3K4 754 aa24.24■■□□□ 1.47
VEGFA-204ENST00000372064 FGAP02671 866 aa24.24■■□□□ 1.47
VEGFA-204ENST00000372064 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-204ENST00000372064 MYH15Q9Y2K3 1946 aa24.24■■□□□ 1.47
VEGFA-204ENST00000372064 ATRNO75882 1429 aa24.24■■□□□ 1.47
VEGFA-204ENST00000372064 SLIT2O94813 1529 aa24.24■■□□□ 1.47
VEGFA-204ENST00000372064 IMMTQ16891 758 aaKnown RBP24.24■■□□□ 1.47
VEGFA-204ENST00000372064 NAP1L2Q9ULW6 460 aaPredicted RBP24.24■■□□□ 1.47
VEGFA-204ENST00000372064 FAM177BA6PVY3 158 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 ATP6V1AP38606 617 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 CHMP4CQ96CF2 233 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 NCOA5Q9HCD5 579 aaKnown RBP24.23■■□□□ 1.47
VEGFA-204ENST00000372064 CCDC87Q9NVE4 849 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 KIF3AQ9Y496 699 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 GPAA1O43292 621 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 SUSD4Q5VX71 490 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 MARCH10Q8NA82 808 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-204ENST00000372064 NAP1L5Q96NT1 182 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-204ENST00000372064 NUP62CLQ9H1M0 184 aa24.23■■□□□ 1.47
VEGFA-204ENST00000372064 CRKLP46109 303 aaKnown RBP24.22■■□□□ 1.47
VEGFA-204ENST00000372064 HELBQ8NG08 1087 aaPredicted RBP24.22■■□□□ 1.47
VEGFA-204ENST00000372064 AK7Q96M32 723 aa24.22■■□□□ 1.47
VEGFA-204ENST00000372064 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.22■■□□□ 1.471e-12■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms