RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 C16orf71Q8IYS4 520 aaPredicted RBP16.09■□□□□ 0.17
TTC39A-204ENST00000371750 DBNDD2Q9BQY9 259 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 DBNLQ9UJU6 430 aaKnown RBP16.09■□□□□ 0.17
TTC39A-204ENST00000371750 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 IRS2Q9Y4H2 1338 aa16.09■□□□□ 0.17
TTC39A-204ENST00000371750 C6orf229H3BNL8 230 aa16.08■□□□□ 0.16
TTC39A-204ENST00000371750 PDE4AP27815 886 aa16.08■□□□□ 0.16
TTC39A-204ENST00000371750 NEUROD6Q96NK8 337 aa16.08■□□□□ 0.16
TTC39A-204ENST00000371750 MED23Q9ULK4 1368 aa16.08■□□□□ 0.16
TTC39A-204ENST00000371750 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
TTC39A-204ENST00000371750 NFKBIEO00221 500 aa16.07■□□□□ 0.16
TTC39A-204ENST00000371750 IFIT2P09913 472 aaKnown RBP16.07■□□□□ 0.16
TTC39A-204ENST00000371750 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
TTC39A-204ENST00000371750 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
TTC39A-204ENST00000371750 XAGE2Q96GT9 111 aa16.07■□□□□ 0.16
TTC39A-204ENST00000371750 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
TTC39A-204ENST00000371750 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
TTC39A-204ENST00000371750 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
TTC39A-204ENST00000371750 RASSF7Q02833 373 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 COL4A5P29400 1685 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 GYG1P46976 350 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 PSMD1Q99460 953 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 MYH13Q9UKX3 1938 aa16.06■□□□□ 0.16
TTC39A-204ENST00000371750 RIMBP2O15034 1052 aa16.05■□□□□ 0.16
TTC39A-204ENST00000371750 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
TTC39A-204ENST00000371750 MX1P20591 662 aa16.04■□□□□ 0.16
TTC39A-204ENST00000371750 PHKA1P46020 1223 aa16.04■□□□□ 0.16
TTC39A-204ENST00000371750 AOC3Q16853 763 aa16.04■□□□□ 0.16
TTC39A-204ENST00000371750 C15orf52Q6ZUT6 534 aaKnown RBP16.04■□□□□ 0.16
TTC39A-204ENST00000371750 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
TTC39A-204ENST00000371750 EYA3Q99504 573 aa16.04■□□□□ 0.16
TTC39A-204ENST00000371750 COL1A1P02452 1464 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-204ENST00000371750 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
TTC39A-204ENST00000371750 BCAMP50895 628 aa16.03■□□□□ 0.16
TTC39A-204ENST00000371750 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
TTC39A-204ENST00000371750 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
TTC39A-204ENST00000371750 CCDC102BQ68D86 513 aa16.03■□□□□ 0.16
TTC39A-204ENST00000371750 FAM84BQ96KN1 310 aaPredicted RBP16.03■□□□□ 0.16
TTC39A-204ENST00000371750 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.16
TTC39A-204ENST00000371750 CCDC88AQ3V6T2 1871 aa16.02■□□□□ 0.16
TTC39A-204ENST00000371750 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.16
TTC39A-204ENST00000371750 PPIP5K2O43314 1243 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 RGS3P49796 1198 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 PRELPP51888 382 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 GPR162Q16538 588 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 CAVIN4Q5BKX8 364 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 PLEKHM2Q8IWE5 1019 aa16.02■□□□□ 0.15
TTC39A-204ENST00000371750 PDE1AP54750 535 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 ZNF804AQ7Z570 1209 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 FBXO33Q7Z6M2 555 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
TTC39A-204ENST00000371750 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
TTC39A-204ENST00000371750 AKAP11Q9UKA4 1901 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 SBF1O95248 1867 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 CHD4Q14839 1912 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
TTC39A-204ENST00000371750 IARSP41252 1262 aaKnown RBP16.01■□□□□ 0.15
TTC39A-204ENST00000371750 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 VPS37DQ86XT2 251 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 GPATCH3Q96I76 525 aa16.01■□□□□ 0.15
TTC39A-204ENST00000371750 SCN9AQ15858 1988 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 UTRNP46939 3433 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 TTC41PQ6P2S7 1318 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 ARID4AP29374 1257 aaPredicted RBP16■□□□□ 0.15
TTC39A-204ENST00000371750 SCARF1Q14162 830 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 STAP2Q9UGK3 403 aa16■□□□□ 0.15
TTC39A-204ENST00000371750 DICER1Q9UPY3 1922 aaKnown RBP15.99■□□□□ 0.15
TTC39A-204ENST00000371750 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 LARGE2Q8N3Y3 721 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 CD209Q9NNX6 404 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 PSME4Q14997 1843 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 MCAMP43121 646 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 NDUFB9Q9Y6M9 179 aa15.99■□□□□ 0.15
TTC39A-204ENST00000371750 AOX1Q06278 1338 aa15.98■□□□□ 0.15
TTC39A-204ENST00000371750 ECE2O60344 883 aa15.98■□□□□ 0.15
TTC39A-204ENST00000371750 COA1Q9GZY4 146 aa15.98■□□□□ 0.15
TTC39A-204ENST00000371750 UQCRFS1P1P0C7P4 283 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 ATP5JP18859 108 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
TTC39A-204ENST00000371750 BOLA2Q9H3K6 86 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 SNRKQ9NRH2 765 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 GNL3LQ9NVN8 582 aaKnown RBP15.97■□□□□ 0.15
TTC39A-204ENST00000371750 JAG2Q9Y219 1238 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 G3V3G9 751 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 IL1R1P14778 569 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
TTC39A-204ENST00000371750 TDRD7Q8NHU6 1098 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms