RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 APOBRQ0VD83 1088 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 IFFO2Q5TF58 517 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 CCDC39Q9UFE4 941 aa34.18■■■■□ 3.06
SSBP3-204ENST00000371320 ANKRD18BA2A2Z9 1011 aa34.17■■■■□ 3.06
SSBP3-204ENST00000371320 SMARCC2Q8TAQ2 1214 aa34.17■■■■□ 3.06
SSBP3-204ENST00000371320 SPATA32Q96LK8 384 aa34.17■■■■□ 3.06
SSBP3-204ENST00000371320 TFIP11Q9UBB9 837 aaKnown RBP34.17■■■■□ 3.06
SSBP3-204ENST00000371320 TRMT112Q9UI30 125 aaKnown RBP34.17■■■■□ 3.06
SSBP3-204ENST00000371320 ABCC12Q96J65 1359 aa34.17■■■■□ 3.06
SSBP3-204ENST00000371320 RIC1Q4ADV7 1423 aa34.17■■■■□ 3.06
SSBP3-204ENST00000371320 IRS4O14654 1257 aaPredicted RBP34.16■■■■□ 3.06
SSBP3-204ENST00000371320 NAP1L5Q96NT1 182 aaPredicted RBP34.16■■■■□ 3.06
SSBP3-204ENST00000371320 CTNNA3Q9UI47 895 aa34.16■■■■□ 3.06
SSBP3-204ENST00000371320 LRP6O75581 1613 aa34.16■■■■□ 3.06
SSBP3-204ENST00000371320 HCLS1P14317 486 aaPredicted RBP34.16■■■■□ 3.06
SSBP3-204ENST00000371320 TTLL5Q6EMB2 1281 aa34.16■■■■□ 3.06
SSBP3-204ENST00000371320 CNNM1Q9NRU3 951 aa34.15■■■■□ 3.06
SSBP3-204ENST00000371320 FUCA2Q9BTY2 467 aa34.15■■■■□ 3.06
SSBP3-204ENST00000371320 LAMA4Q16363 1823 aa34.14■■■■□ 3.06
SSBP3-204ENST00000371320 RESTQ13127 1097 aa34.14■■■■□ 3.06
SSBP3-204ENST00000371320 NSUN7Q8NE18 718 aaKnown RBP34.14■■■■□ 3.06
SSBP3-204ENST00000371320 GOLGA6L4A6NEF3 574 aa34.13■■■■□ 3.05
SSBP3-204ENST00000371320 LEO1Q8WVC0 666 aaPredicted RBP34.13■■■■□ 3.05
SSBP3-204ENST00000371320 APPBP2Q92624 585 aa34.13■■■■□ 3.05
SSBP3-204ENST00000371320 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.13■■■■□ 3.05
SSBP3-204ENST00000371320 ERVV-1B6SEH8 477 aa34.13■■■■□ 3.05
SSBP3-204ENST00000371320 ZSCAN16Q9H4T2 348 aaPredicted RBP34.13■■■■□ 3.05
SSBP3-204ENST00000371320 PI16Q6UXB8 463 aa34.12■■■■□ 3.05
SSBP3-204ENST00000371320 DZIP3Q86Y13 1208 aaKnown RBP34.12■■■■□ 3.05
SSBP3-204ENST00000371320 IL6STP40189 918 aaPredicted RBP34.11■■■■□ 3.05
SSBP3-204ENST00000371320 HMGN5P82970 282 aaKnown RBP34.11■■■■□ 3.05
SSBP3-204ENST00000371320 TBC1D2BQ9UPU7 963 aa34.11■■■■□ 3.05
SSBP3-204ENST00000371320 PDE8AO60658 829 aa34.11■■■■□ 3.05
SSBP3-204ENST00000371320 IMMTQ16891 758 aaKnown RBP34.11■■■■□ 3.05
SSBP3-204ENST00000371320 CHST3Q7LGC8 479 aa34.11■■■■□ 3.05
SSBP3-204ENST00000371320 EIF2AK3Q9NZJ5 1116 aaKnown RBP34.11■■■■□ 3.05
SSBP3-204ENST00000371320 NAP1L2Q9ULW6 460 aaPredicted RBP34.11■■■■□ 3.05
SSBP3-204ENST00000371320 KIF3AQ9Y496 699 aa34.11■■■■□ 3.05
SSBP3-204ENST00000371320 CTDNEP1O95476 244 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 LIG1P18858 919 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 CCT2P78371 535 aaKnown RBP34.1■■■■□ 3.05
SSBP3-204ENST00000371320 ZNF274Q96GC6 653 aaPredicted RBP34.1■■■■□ 3.05
SSBP3-204ENST00000371320 ZKSCAN5Q9Y2L8 839 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 KAT6BQ8WYB5 2073 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 PTPDC1A2A3K4 754 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 FOXP2O15409 715 aa34.1■■■■□ 3.05
SSBP3-204ENST00000371320 PUS7LQ9H0K6 701 aaKnown RBP34.1■■■■□ 3.05
SSBP3-204ENST00000371320 MCAMP43121 646 aa34.09■■■■□ 3.05
SSBP3-204ENST00000371320 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.09■■■■□ 3.051e-6■■■□□ 17.7
SSBP3-204ENST00000371320 PDIA3P30101 505 aaKnown RBP34.08■■■■□ 3.05
SSBP3-204ENST00000371320 PLCH1Q4KWH8 1693 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 FGAP02671 866 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 PTMAP06454 111 aaKnown RBP34.08■■■■□ 3.05
SSBP3-204ENST00000371320 MCM5P33992 734 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 NAA16Q6N069 864 aaPredicted RBP34.08■■■■□ 3.05
SSBP3-204ENST00000371320 VGLL2Q8N8G2 317 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 CHMP4CQ96CF2 233 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 NUP62CLQ9H1M0 184 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 USP25Q9UHP3 1055 aa34.08■■■■□ 3.05
SSBP3-204ENST00000371320 HAND2P61296 217 aa34.07■■■■□ 3.04
SSBP3-204ENST00000371320 ZNF512BQ96KM6 892 aaPredicted RBP34.07■■■■□ 3.04
SSBP3-204ENST00000371320 CCDC192P0DO97 292 aa34.07■■■■□ 3.04
SSBP3-204ENST00000371320 FBXL16Q8N461 479 aa34.07■■■■□ 3.04
SSBP3-204ENST00000371320 NCOA5Q9HCD5 579 aaKnown RBP34.07■■■■□ 3.04
SSBP3-204ENST00000371320 ANKRD36CQ5JPF3 1778 aa34.07■■■■□ 3.04
SSBP3-204ENST00000371320 LTBP4Q8N2S1 1624 aa34.06■■■■□ 3.04
SSBP3-204ENST00000371320 ZSCAN25Q6NSZ9 544 aa34.06■■■■□ 3.04
SSBP3-204ENST00000371320 ZNF34Q8IZ26 560 aa34.06■■■■□ 3.04
SSBP3-204ENST00000371320 UBN2Q6ZU65 1347 aa34.06■■■■□ 3.04
SSBP3-204ENST00000371320 PDE8BO95263 885 aa34.05■■■■□ 3.04
SSBP3-204ENST00000371320 MAP3K11Q16584 847 aa34.05■■■■□ 3.04
SSBP3-204ENST00000371320 CFAP45Q9UL16 551 aa34.05■■■■□ 3.04
SSBP3-204ENST00000371320 GPAA1O43292 621 aa34.05■■■■□ 3.04
SSBP3-204ENST00000371320 ZNF500O60304 480 aaPredicted RBP34.05■■■■□ 3.04
SSBP3-204ENST00000371320 DACT1Q9NYF0 836 aa34.05■■■■□ 3.04
SSBP3-204ENST00000371320 COL16A1Q07092 1604 aaPredicted RBP34.04■■■■□ 3.04
SSBP3-204ENST00000371320 TTF1Q15361 905 aaPredicted RBP34.03■■■■□ 3.04
SSBP3-204ENST00000371320 CAMK4Q16566 473 aa34.03■■■■□ 3.04
SSBP3-204ENST00000371320 DDX19AQ9NUU7 478 aaKnown RBP34.03■■■■□ 3.04
SSBP3-204ENST00000371320 FOSBP53539 338 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 ROBO1Q9Y6N7 1651 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 SALL1Q9NSC2 1324 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 NUP98P52948 1817 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 KDM4AO75164 1064 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 ADCY5O95622 1261 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 ADD2P35612 726 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 EVCP57679 992 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 PGBD1Q96JS3 809 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 CDCA7Q9BWT1 371 aaPredicted RBP34.02■■■■□ 3.04
SSBP3-204ENST00000371320 MYH3P11055 1940 aa34.02■■■■□ 3.04
SSBP3-204ENST00000371320 SLC9C2Q5TAH2 1124 aa34.01■■■■□ 3.04
SSBP3-204ENST00000371320 BICD2Q8TD16 824 aa34.01■■■■□ 3.04
SSBP3-204ENST00000371320 TNMDQ9H2S6 317 aa34.01■■■■□ 3.04
SSBP3-204ENST00000371320 ZNF213O14771 459 aa34■■■■□ 3.03
SSBP3-204ENST00000371320 NWD2Q9ULI1 1742 aa34■■■■□ 3.03
SSBP3-204ENST00000371320 COL22A1Q8NFW1 1626 aaPredicted RBP34■■■■□ 3.03
SSBP3-204ENST00000371320 AK7Q96M32 723 aa34■■■■□ 3.03
SSBP3-204ENST00000371320 GPHNQ9NQX3 736 aaPredicted RBP34■■■■□ 3.03
SSBP3-204ENST00000371320 A0A0G2JS52 829 aa33.99■■■■□ 3.03
SSBP3-204ENST00000371320 PRC1O43663 620 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms