RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
GTF2B-201ENST00000370500 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
GTF2B-201ENST00000370500 G2E3Q7L622 706 aa12.03□□□□□ -0.48
GTF2B-201ENST00000370500 C16orf71Q8IYS4 520 aaPredicted RBP12.03□□□□□ -0.48
GTF2B-201ENST00000370500 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
GTF2B-201ENST00000370500 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 LINS1Q8NG48 757 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 JDP2Q8WYK2 163 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 RRAGCQ9HB90 399 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 NMRK2Q9NPI5 230 aa12.02□□□□□ -0.49
GTF2B-201ENST00000370500 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
GTF2B-201ENST00000370500 SNED1Q8TER0 1413 aa12.01□□□□□ -0.49
GTF2B-201ENST00000370500 NEURL1BA8MQ27 555 aa12.01□□□□□ -0.49
GTF2B-201ENST00000370500 IGKV5-2P06315 115 aa12.01□□□□□ -0.49
GTF2B-201ENST00000370500 OLFM4Q6UX06 510 aa12.01□□□□□ -0.49
GTF2B-201ENST00000370500 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
GTF2B-201ENST00000370500 RTFDC1Q9BY42 306 aaPredicted RBP12.01□□□□□ -0.49
GTF2B-201ENST00000370500 H7C1W4 665 aa12□□□□□ -0.49
GTF2B-201ENST00000370500 FZD9O00144 591 aa12□□□□□ -0.49
GTF2B-201ENST00000370500 CT47B1P0C2W7 299 aaPredicted RBP12□□□□□ -0.49
GTF2B-201ENST00000370500 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
GTF2B-201ENST00000370500 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
GTF2B-201ENST00000370500 DPP8Q6V1X1 898 aaPredicted RBP12□□□□□ -0.49
GTF2B-201ENST00000370500 MPNDQ8N594 471 aa12□□□□□ -0.49
GTF2B-201ENST00000370500 CACNA1FO60840 1977 aa12□□□□□ -0.49
GTF2B-201ENST00000370500 IQCA1LA6NCM1 817 aa11.99□□□□□ -0.49
GTF2B-201ENST00000370500 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
GTF2B-201ENST00000370500 FSTL1Q12841 308 aa11.99□□□□□ -0.49
GTF2B-201ENST00000370500 GCKRQ14397 625 aa11.99□□□□□ -0.49
GTF2B-201ENST00000370500 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
GTF2B-201ENST00000370500 DICER1Q9UPY3 1922 aaKnown RBP11.98□□□□□ -0.49
GTF2B-201ENST00000370500 EIF6P56537 245 aaKnown RBP11.98□□□□□ -0.49
GTF2B-201ENST00000370500 CWF19L2Q2TBE0 894 aaKnown RBP11.98□□□□□ -0.49
GTF2B-201ENST00000370500 GPC2Q8N158 579 aa11.98□□□□□ -0.49
GTF2B-201ENST00000370500 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
GTF2B-201ENST00000370500 PLA2G12BQ9BX93 195 aa11.98□□□□□ -0.49
GTF2B-201ENST00000370500 CACNA1SQ13698 1873 aa11.97□□□□□ -0.49
GTF2B-201ENST00000370500 DDNO94850 711 aaPredicted RBP11.97□□□□□ -0.49
GTF2B-201ENST00000370500 CTSWP56202 376 aa11.97□□□□□ -0.49
GTF2B-201ENST00000370500 ALDH1L2Q3SY69 923 aa11.97□□□□□ -0.49
GTF2B-201ENST00000370500 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
GTF2B-201ENST00000370500 CDC5LQ99459 802 aaKnown RBP11.97□□□□□ -0.49
GTF2B-201ENST00000370500 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
GTF2B-201ENST00000370500 PTPRCP08575 1304 aa11.97□□□□□ -0.49
GTF2B-201ENST00000370500 POTECB2RU33 542 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 ALDH1L1O75891 902 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 HSPA6P17066 643 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 KIAA2012Q0VF49 1180 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 BEND3Q5T5X7 828 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 NIM1KQ8IY84 436 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 SMC1BQ8NDV3 1235 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 ZNRF3Q9ULT6 936 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 CCDC88AQ3V6T2 1871 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 TIAM2Q8IVF5 1701 aa11.96□□□□□ -0.49
GTF2B-201ENST00000370500 DDX60Q8IY21 1712 aaKnown RBP11.96□□□□□ -0.49
GTF2B-201ENST00000370500 WDR90Q96KV7 1748 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 ANKRD18AQ8IVF6 992 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 EYA3Q99504 573 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
GTF2B-201ENST00000370500 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 LAMB2P55268 1798 aa11.95□□□□□ -0.5
GTF2B-201ENST00000370500 F6X3S4 739 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 CSF1RP07333 972 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 CASP7P55210 303 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 AOC3Q16853 763 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 PNMA8AQ86V59 439 aaPredicted RBP11.94□□□□□ -0.5
GTF2B-201ENST00000370500 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
GTF2B-201ENST00000370500 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 SEC31BQ9NQW1 1179 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 HACL1Q9UJ83 578 aa11.94□□□□□ -0.5
GTF2B-201ENST00000370500 GRM8O00222 908 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 APLP1P51693 650 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
GTF2B-201ENST00000370500 TNIP1Q15025 636 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 TYW1BQ6NUM6 668 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 BSDC1Q9NW68 430 aaPredicted RBP11.93□□□□□ -0.5
GTF2B-201ENST00000370500 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
GTF2B-201ENST00000370500 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
GTF2B-201ENST00000370500 GPSM2P81274 684 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 SLC4A10Q6U841 1118 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 TBC1D16Q8TBP0 767 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
GTF2B-201ENST00000370500 TAF1DQ9H5J8 278 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-201ENST00000370500 C9orf78Q9NZ63 289 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-201ENST00000370500 XDHP47989 1333 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms