RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 SCAND2PQ9GZW5 306 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 NRKQ7Z2Y5 1582 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 CDK11BP21127 795 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 NAA16Q6N069 864 aaPredicted RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 LSG1Q9H089 658 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 ARMT1Q9H993 441 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 B4E1Z4 1266 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 JAK2O60674 1132 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 CDKL5O76039 1030 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 RPS6KB1P23443 525 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 ME3Q16798 604 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 TRAPPC3LQ5T215 181 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 NLRP10Q86W26 655 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 FAM43AQ8N2R8 423 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 ZNF622Q969S3 477 aaKnown RBP eCLIP8.34□□□□□ -1.074e-6■■□□□ 13.5
TGFBR3-202ENST00000370399 INTS4Q96HW7 963 aaKnown RBP8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 CEMIPQ8WUJ3 1361 aa8.34□□□□□ -1.07
TGFBR3-202ENST00000370399 PHKA1P46020 1223 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 BCAMP50895 628 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 PUM3Q15397 648 aaKnown RBP8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 OTUD7BQ6GQQ9 843 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 IQCA1Q86XH1 822 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 SLC26A6Q9BXS9 759 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 BRMS1Q9HCU9 246 aa8.34□□□□□ -1.08
TGFBR3-202ENST00000370399 PRDM1O75626 825 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 IARSP41252 1262 aaKnown RBP8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 PDIA6Q15084 440 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 ZNF592Q92610 1267 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 GYG1P46976 350 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 APPBP2Q92624 585 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 USP25Q9UHP3 1055 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 H7C1W4 665 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 ISM2Q6H9L7 571 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 HAUS7Q99871 368 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
TGFBR3-202ENST00000370399 TSPY2A6NKD2 308 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 CCDC173Q0VFZ6 552 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 CCDC102BQ68D86 513 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 LPIN2Q92539 896 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 MYL10Q9BUA6 226 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 ZNF532Q9HCE3 1301 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 ATP10DQ9P241 1426 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 PTPDC1A2A3K4 754 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 RIMBP2O15034 1052 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 LETM1O95202 739 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 CCDC183Q5T5S1 534 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 IL25Q9H293 177 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 BIN1O00499 593 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 ZBTB43O43298 467 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 UBE2HP62256 183 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 MTX1Q13505 466 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 KIF2CQ99661 725 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 ESPNB1AK53 854 aa8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 GADD45BO75293 160 aaPredicted RBP8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 HSPD1P10809 573 aaKnown RBP8.32□□□□□ -1.08
TGFBR3-202ENST00000370399 SLIT1O75093 1534 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 PDE8BO95263 885 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 CYP21A2P08686 494 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 WTAPQ15007 396 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 ZNF444Q8N0Y2 327 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 TTLL11Q8NHH1 800 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 MAP4K1Q92918 833 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 RNF41Q9H4P4 317 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 DACT1Q9NYF0 836 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 FER1L4A9Z1Z3 1794 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 SUSD4Q5VX71 490 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 PDILTQ8N807 584 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 FSIP1Q8NA03 581 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 SPATA5Q8NB90 893 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 VAT1LQ9HCJ6 419 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 SRP68Q9UHB9 627 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 REREQ9P2R6 1566 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 SMC2O95347 1197 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 FGAP02671 866 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 CTDSPL2Q05D32 466 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 CTCFLQ8NI51 663 aaPredicted RBP8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 ALG1Q9BT22 464 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 NYXQ9GZU5 481 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 NCAPD2Q15021 1401 aa8.31□□□□□ -1.08
TGFBR3-202ENST00000370399 MAGEB6P1A0A0J9YX57 407 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 E7EWF7 191 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 CLSTN1O94985 981 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
TGFBR3-202ENST00000370399 LARGE1O95461 756 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms