RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DPH6Q7L8W6 267 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 UBLCP1Q8WVY7 318 aaPredicted RBP14.09□□□□□ -0.15
HCFC1-202ENST00000369984 GUCA1BQ9UMX6 200 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 KLF18A0A0U1RQI7 1052 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
HCFC1-202ENST00000369984 PLCB3Q01970 1234 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 C10orf67Q8IYJ2 551 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
HCFC1-202ENST00000369984 GRIN2BQ13224 1484 aa14.08□□□□□ -0.15
HCFC1-202ENST00000369984 IMPG2Q9BZV3 1241 aa14.08□□□□□ -0.15
HCFC1-202ENST00000369984 RHOXF2BP0C7M4 288 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 SETDB1Q15047 1291 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 LDHAL6AQ6ZMR3 332 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 PRPF31Q8WWY3 499 aaKnown RBP14.08□□□□□ -0.16
HCFC1-202ENST00000369984 RHOXF2Q9BQY4 288 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 ASIC1P78348 528 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 PPP1R42Q7Z4L9 355 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 FAM76AQ8TAV0 307 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 STMN2Q93045 179 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 LZTFL1Q9NQ48 299 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 NEK11Q8NG66 645 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 MRPS27Q92552 414 aaKnown RBP14.08□□□□□ -0.16
HCFC1-202ENST00000369984 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
HCFC1-202ENST00000369984 MAK16Q9BXY0 300 aaKnown RBP14.08□□□□□ -0.16
HCFC1-202ENST00000369984 SNRKQ9NRH2 765 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 SNX16P57768 344 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 Q6ZUG5 572 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 NAIPQ13075 1403 aa14.08□□□□□ -0.16
HCFC1-202ENST00000369984 HDXQ7Z353 690 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 LRRC2Q9BYS8 371 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 GMNNO75496 209 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 GSTO1P78417 241 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 NUCB1Q02818 461 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 PIK3R4Q99570 1358 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CLCN1P35523 988 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 VAV2P52735 878 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 SPAG1Q07617 926 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CNNM2Q9H8M5 875 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 BICDL2A1A5D9 508 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 TUBB4AP04350 444 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 LMOD1P29536 600 aaPredicted RBP14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CCDC42Q96M95 316 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
HCFC1-202ENST00000369984 LACTBP83111 547 aaPredicted RBP14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CALM1P0DP23 149 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CALM2P0DP24 149 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 CALM3P0DP25 149 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 ZNF569Q5MCW4 686 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 EPSTI1Q96J88 318 aa14.07□□□□□ -0.16
HCFC1-202ENST00000369984 SH3BP5O60239 455 aa14.06□□□□□ -0.16
HCFC1-202ENST00000369984 ALDH3A1P30838 453 aa14.06□□□□□ -0.16
HCFC1-202ENST00000369984 DNM1Q05193 864 aaKnown RBP14.06□□□□□ -0.16
HCFC1-202ENST00000369984 MTRF1LQ9UGC7 380 aaKnown RBP14.06□□□□□ -0.16
HCFC1-202ENST00000369984 PRG4Q92954 1404 aaPredicted RBP14.06□□□□□ -0.16
HCFC1-202ENST00000369984 TYRO3Q06418 890 aa14.06□□□□□ -0.16
HCFC1-202ENST00000369984 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
HCFC1-202ENST00000369984 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
HCFC1-202ENST00000369984 DACT1Q9NYF0 836 aa14.06□□□□□ -0.16
HCFC1-202ENST00000369984 CIB2O75838 187 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 LDHCP07864 332 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.05□□□□□ -0.166e-8■■■□□ 17.2
HCFC1-202ENST00000369984 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 FAM13AO94988 1023 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 DHX58Q96C10 678 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 GAS8O95995 478 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 SDSP20132 328 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 ESR2Q92731 530 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 TOP2BQ02880 1626 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 SATB1Q01826 763 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 KIAA1524Q8TCG1 905 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 ZKSCAN5Q9Y2L8 839 aa14.05□□□□□ -0.16
HCFC1-202ENST00000369984 PRIM1P49642 420 aaKnown RBP14.04□□□□□ -0.16
HCFC1-202ENST00000369984 FAM160A1Q05DH4 1040 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 INTS8Q75QN2 995 aaKnown RBP14.04□□□□□ -0.16
HCFC1-202ENST00000369984 ATP5DP30049 168 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 NAPAP54920 295 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 CEP85LQ5SZL2 805 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 B4GALNT4Q76KP1 1039 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 KRT2P35908 639 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.04□□□□□ -0.16
HCFC1-202ENST00000369984 CUL7Q14999 1698 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 BRF1Q92994 677 aa14.04□□□□□ -0.16
HCFC1-202ENST00000369984 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 IGHDP01880 384 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 TLDC2A0PJX2 215 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 GBP1P32455 592 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 ZNF853P0CG23 659 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 GEN1Q17RS7 908 aa14.03□□□□□ -0.16
HCFC1-202ENST00000369984 CCDC170Q8IYT3 715 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms