RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SLC8A1P32418 973 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 PSMC4P43686 418 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 AFMP43652 599 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 LRMPQ12912 555 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.7□□□□□ -0.86
LCA5-201ENST00000369846 CCDC42Q96M95 316 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 TSG101Q99816 390 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 SELENOOQ9BVL4 669 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 TSPYL2Q9H2G4 693 aaPredicted RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 ZNF521Q96K83 1311 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 E9PCH4 1651 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 POLE2P56282 527 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 MUM1Q2TAK8 710 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 MCTP2Q6DN12 878 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 STX17P56962 302 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 KRT83P78385 493 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 ATP2B2Q01814 1243 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 CCDC122Q5T0U0 273 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 MIER3Q7Z3K6 550 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 MCUR1Q96AQ8 359 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 KIF1BPQ96EK5 621 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.7□□□□□ -0.86
LCA5-201ENST00000369846 NUCKS1Q9H1E3 243 aaKnown RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 FAF1Q9UNN5 650 aaPredicted RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 RABGAP1Q9Y3P9 1069 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 CCDC196A0A1B0GTZ2 297 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 ACTN2P35609 894 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 PSMD6Q15008 389 aa9.7□□□□□ -0.86
LCA5-201ENST00000369846 TRIM6Q9C030 488 aaPredicted RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 ZSCAN16Q9H4T2 348 aaPredicted RBP9.7□□□□□ -0.86
LCA5-201ENST00000369846 MARCKSP29966 332 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 ZNF131P52739 623 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 TPD52P55327 224 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 SNCBQ16143 134 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 SPAG5Q96R06 1193 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 PSMD1Q99460 953 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 ANAPC4Q9UJX5 808 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
LCA5-201ENST00000369846 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 GOLGA8BA8MQT2 603 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 GIGYF1O75420 1035 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 SMARCC2Q8TAQ2 1214 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 SLC12A5Q9H2X9 1139 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 TMEM63CQ9P1W3 806 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 MAGI2Q86UL8 1455 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 A0A087WUV0 522 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 SDSP20132 328 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 ZNF75DP51815 510 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 RNASE9P60153 205 aaKnown RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 IRX5P78411 483 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 ARID5AQ03989 594 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 EFCAB13Q8IY85 973 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 SECISBP2LQ93073 1101 aaKnown RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 FAM212AQ96EL1 285 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
LCA5-201ENST00000369846 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 NKIRAS1Q9NYS0 192 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 ERBINQ96RT1 1412 aa9.69□□□□□ -0.86
LCA5-201ENST00000369846 CIB2O75838 187 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 FERP16591 822 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 PDE6BP35913 854 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 TERF2Q15554 542 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 CCDC110Q8TBZ0 833 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 CTAGE1Q96RT6 745 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 POTEJP0CG39 1038 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 VPS41P49754 854 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 TTC22Q5TAA0 569 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 NAPGQ99747 312 aaPredicted RBP9.68□□□□□ -0.86
LCA5-201ENST00000369846 C9orf84Q5VXU9 1444 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 RPGRIP1LQ68CZ1 1315 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 PRC1O43663 620 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 OPHN1O60890 802 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 SESN3P58005 492 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 ZKSCAN8Q15776 578 aaPredicted RBP9.68□□□□□ -0.86
LCA5-201ENST00000369846 IFI16Q16666 785 aaKnown RBP9.68□□□□□ -0.86
LCA5-201ENST00000369846 EFCAB2Q5VUJ9 269 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 C8orf74Q6P047 294 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 MPHOSPH8Q99549 860 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 SPAG1Q07617 926 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 GKAP1Q5VSY0 366 aaPredicted RBP9.68□□□□□ -0.86
LCA5-201ENST00000369846 GPR161Q8N6U8 529 aaKnown RBP9.68□□□□□ -0.86
LCA5-201ENST00000369846 BRF1Q92994 677 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 MMRN2Q9H8L6 949 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 EID1Q9Y6B2 187 aa9.68□□□□□ -0.86
LCA5-201ENST00000369846 TTC19Q6DKK2 380 aaPredicted RBP9.67□□□□□ -0.86
LCA5-201ENST00000369846 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.67□□□□□ -0.86
LCA5-201ENST00000369846 VPS52Q8N1B4 723 aa9.67□□□□□ -0.86
LCA5-201ENST00000369846 CCDC63Q8NA47 563 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms