RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 ZNF444Q8N0Y2 327 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 FAM227BQ96M60 508 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 PXDNLA1KZ92 1463 aa6.19□□□□□ -1.42
SMNDC1-202ENST00000369603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ZBTB43O43298 467 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 PRC1O43663 620 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 KIF5BP33176 963 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 CTSWP56202 376 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ZNF594Q96JF6 807 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 TCEANC2Q96MN5 208 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 HAUS7Q99871 368 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 DSCC1Q9BVC3 393 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 SLC4A4Q9Y6R1 1079 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 CEMIPQ8WUJ3 1361 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 PRAMEF22A3QJZ6 481 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 IPO7O95373 1038 aaKnown RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 WTAPQ15007 396 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 LLPHQ9BRT6 129 aaKnown RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ANO10Q9NW15 660 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 CCNL1Q9UK58 526 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 DENND2AQ9ULE3 1009 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 SMTNL1A8MU46 457 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 C6orf229H3BNL8 230 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 GNPATO15228 680 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 UVSSAQ2YD98 709 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 TRAPPC3LQ5T215 181 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ATL3Q6DD88 541 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 MICU3Q86XE3 530 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ASAP1Q9ULH1 1129 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ATP10DQ9P241 1426 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ERVV-1B6SEH8 477 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 IKQ13123 557 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 FAM98CQ17RN3 349 aaKnown RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ZSCAN23Q3MJ62 389 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 FILIP1LQ4L180 1135 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 ZNF804AQ7Z570 1209 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 MPNDQ8N594 471 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 HELBQ8NG08 1087 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 GDPD2Q9HCC8 539 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 TMOD2Q9NZR1 351 aa6.18□□□□□ -1.42
SMNDC1-202ENST00000369603 OVOS2A0A0G2JMS6 1433 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 MAGEB6P1A0A0J9YX57 407 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 HCLS1P14317 486 aaPredicted RBP6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 SYT1P21579 422 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 LRSAM1Q6UWE0 723 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 TFIP11Q9UBB9 837 aaKnown RBP6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 LOC102724428A0A0B4J2F2 783 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 A0A0U1RQG5 324 aaPredicted RBP6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 CCP110O43303 1012 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 CBFA2T2O43439 604 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 SIK1P57059 783 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 GUCY1B3Q02153 619 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 USP48Q86UV5 1035 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 MAGEB6Q8N7X4 407 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 CDK5RAP3Q96JB5 506 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 LRRC2Q9BYS8 371 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 TCEAL9Q9UHQ7 104 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 TSPY2A6NKD2 308 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 H7C1W4 665 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 SMC2O95347 1197 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 KCNG4Q8TDN1 519 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 TMEM87BQ96K49 555 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 SEC63Q9UGP8 760 aaKnown RBP6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 USP21Q9UK80 565 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 ANKRD26Q9UPS8 1709 aa6.17□□□□□ -1.42
SMNDC1-202ENST00000369603 CALM1P0DP23 149 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CALM2P0DP24 149 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CALM3P0DP25 149 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PLCG2P16885 1265 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ATP2B2Q01814 1243 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 STIM1Q13586 685 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 FSIP1Q8NA03 581 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 RBM27Q9P2N5 1060 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CNPY2Q9Y2B0 182 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 RTL9Q8NET4 1388 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 GPAA1O43292 621 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 BMP15O95972 392 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 IGKV5-2P06315 115 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 GNAQP50148 359 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 RTN1Q16799 776 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PPP4R3BQ5MIZ7 849 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ZNF771Q7L3S4 317 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ZSCAN29Q8IWY8 852 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CCDC12Q8WUD4 166 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PIGBQ92521 554 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ZSWIM6Q9HCJ5 1215 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 DBNLQ9UJU6 430 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 KNDC1Q76NI1 1749 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 RGS12O14924 1447 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PTPN12Q05209 780 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CAMK4Q16566 473 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 BRAPQ7Z569 592 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 HOMER1Q86YM7 354 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CERS3Q8IU89 383 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 CNBD1Q8NA66 436 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 MAP4K1Q92918 833 aa6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 PYM1Q9BRP8 204 aaKnown RBP6.16□□□□□ -1.42
SMNDC1-202ENST00000369603 ALG1Q9BT22 464 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms