RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
PHTF1-202ENST00000369598 CTIFO43310 598 aaKnown RBP17.9■□□□□ 0.46
PHTF1-202ENST00000369598 STX6O43752 255 aa17.9■□□□□ 0.46
PHTF1-202ENST00000369598 DZIP3Q86Y13 1208 aaKnown RBP17.9■□□□□ 0.46
PHTF1-202ENST00000369598 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
PHTF1-202ENST00000369598 TIGD1Q96MW7 591 aa17.9■□□□□ 0.46
PHTF1-202ENST00000369598 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
PHTF1-202ENST00000369598 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.46
PHTF1-202ENST00000369598 LARGE1O95461 756 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 GPTP24298 496 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 SMC3Q9UQE7 1217 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 CAPN2P17655 700 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 UBE2HP62256 183 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 FAM89AQ96GI7 184 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 TCEANC2Q96MN5 208 aa17.89■□□□□ 0.45
PHTF1-202ENST00000369598 ZSCAN22P10073 491 aaPredicted RBP17.88■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 LIG1P18858 919 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 CRKLP46109 303 aaKnown RBP17.88■□□□□ 0.45
PHTF1-202ENST00000369598 ANO6Q4KMQ2 910 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 PCCAP05165 728 aaPredicted RBP17.88■□□□□ 0.45
PHTF1-202ENST00000369598 TFCP2Q12800 502 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 KRT222Q8N1A0 295 aa17.88■□□□□ 0.45
PHTF1-202ENST00000369598 ZBTB38Q8NAP3 1195 aaPredicted RBP17.88■□□□□ 0.45
PHTF1-202ENST00000369598 CACTINQ8WUQ7 758 aaKnown RBP17.88■□□□□ 0.45
PHTF1-202ENST00000369598 CEBPZQ03701 1054 aaKnown RBP17.87■□□□□ 0.45
PHTF1-202ENST00000369598 CUL4AQ13619 759 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 INTS5Q6P9B9 1019 aaKnown RBP17.87■□□□□ 0.45
PHTF1-202ENST00000369598 FBXO38Q6PIJ6 1188 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 PPFIA3O75145 1194 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC192P0DO97 292 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 FOSBP53539 338 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC144BQ3MJ40 725 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC144CPQ8IYA2 1237 aa17.87■□□□□ 0.45
PHTF1-202ENST00000369598 ITPK1Q13572 414 aa17.86■□□□□ 0.45
PHTF1-202ENST00000369598 AK2P54819 239 aa17.86■□□□□ 0.45
PHTF1-202ENST00000369598 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
PHTF1-202ENST00000369598 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
PHTF1-202ENST00000369598 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
PHTF1-202ENST00000369598 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
PHTF1-202ENST00000369598 NEK11Q8NG66 645 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC66A2RUB6 948 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 CCDC57Q2TAC2 916 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 ZSCAN25Q6NSZ9 544 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 TLR7Q9NYK1 1049 aaKnown RBP17.85■□□□□ 0.45
PHTF1-202ENST00000369598 GOLGA6L4A6NEF3 574 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
PHTF1-202ENST00000369598 F13A1P00488 732 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 GJB2P29033 226 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TNNT3P45378 269 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-202ENST00000369598 DACT1Q9NYF0 836 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TAOK2Q9UL54 1235 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TJP1Q07157 1748 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 SMTNL1A8MU46 457 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TYRO3Q06418 890 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 TAF3Q5VWG9 929 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
PHTF1-202ENST00000369598 LRRN4CLQ8ND94 238 aa17.84■□□□□ 0.45
PHTF1-202ENST00000369598 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
PHTF1-202ENST00000369598 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.45
PHTF1-202ENST00000369598 SYNE4Q8N205 404 aa17.83■□□□□ 0.45
PHTF1-202ENST00000369598 CBX8Q9HC52 389 aa17.83■□□□□ 0.45
PHTF1-202ENST00000369598 TUBGCP6Q96RT7 1819 aa17.83■□□□□ 0.45
PHTF1-202ENST00000369598 AFF2P51816 1311 aa17.83■□□□□ 0.44
PHTF1-202ENST00000369598 RBM6P78332 1123 aaKnown RBP17.83■□□□□ 0.44
PHTF1-202ENST00000369598 CCDC85AQ96PX6 553 aaPredicted RBP17.83■□□□□ 0.44
PHTF1-202ENST00000369598 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.44
PHTF1-202ENST00000369598 GABPB1Q06547 395 aaPredicted RBP17.82■□□□□ 0.44
PHTF1-202ENST00000369598 EVI5LQ96CN4 794 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 BOLA2Q9H3K6 86 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 CASTP20810 708 aaKnown RBP17.82■□□□□ 0.44
PHTF1-202ENST00000369598 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
PHTF1-202ENST00000369598 ERCC6LQ2NKX8 1250 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 FAM182BQ5T319 152 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 PLA2G12BQ9BX93 195 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.82■□□□□ 0.44
PHTF1-202ENST00000369598 EYA2O00167 538 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 MCM2P49736 904 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 TNMDQ9H2S6 317 aa17.82■□□□□ 0.44
PHTF1-202ENST00000369598 STK3Q13188 491 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 TAF7LQ5H9L4 462 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 FUCA2Q9BTY2 467 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 NUP62CLQ9H1M0 184 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 MRVI1Q9Y6F6 885 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
PHTF1-202ENST00000369598 RUFY3Q7L099 469 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 ZCCHC17Q9NP64 241 aaKnown RBP17.81■□□□□ 0.44
PHTF1-202ENST00000369598 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
PHTF1-202ENST00000369598 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
PHTF1-202ENST00000369598 IFIT5Q13325 482 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms