RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 TXNRD3Q86VQ6 643 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 GPC2Q8N158 579 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 GREM2Q9H772 168 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 PPEF1O14829 653 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-204ENST00000369530 ZSCAN20P17040 1043 aaPredicted RBP8.51□□□□□ -1.05
CSDE1-204ENST00000369530 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
CSDE1-204ENST00000369530 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 KLRK1P26718 216 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
CSDE1-204ENST00000369530 MAP3K11Q16584 847 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 DACT2Q5SW24 774 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 PLXNA1Q9UIW2 1896 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 LTBP2Q14767 1821 aa8.51□□□□□ -1.05
CSDE1-204ENST00000369530 ALDH1B1P30837 517 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 PPP1R42Q7Z4L9 355 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 PITPNM2Q9BZ72 1349 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 MYL6BP14649 208 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 C1QTNF8P60827 252 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 CERS5Q8N5B7 392 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 H0YIN7 160 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 MRE11P49959 708 aa8.5□□□□□ -1.05
CSDE1-204ENST00000369530 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
CSDE1-204ENST00000369530 TRIM27P14373 513 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 ANTXR1Q9H6X2 564 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 KCNQ5Q9NR82 932 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 KDM2BQ8NHM5 1336 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-204ENST00000369530 EGFRP00533 1210 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 ST5P78524 1137 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 CST9Q5W186 159 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 DPF2Q92785 391 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 FAM89AQ96GI7 184 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 COPRSQ9NQ92 184 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 CWC25Q9NXE8 425 aaPredicted RBP8.49□□□□□ -1.05
CSDE1-204ENST00000369530 BAZ2AQ9UIF9 1905 aaKnown RBP8.49□□□□□ -1.05
CSDE1-204ENST00000369530 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 PPP4R3BQ5MIZ7 849 aa8.49□□□□□ -1.05
CSDE1-204ENST00000369530 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 TDRD7Q8NHU6 1098 aaKnown RBP8.48□□□□□ -1.05
CSDE1-204ENST00000369530 SSH3Q8TE77 659 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 TAF1DQ9H5J8 278 aaPredicted RBP8.48□□□□□ -1.05
CSDE1-204ENST00000369530 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 C21orf2O43822 256 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 POTEJP0CG39 1038 aa8.48□□□□□ -1.05
CSDE1-204ENST00000369530 RBM17Q96I25 401 aaKnown RBP8.48□□□□□ -1.05
CSDE1-204ENST00000369530 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
CSDE1-204ENST00000369530 GRM8O00222 908 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-204ENST00000369530 MOGSQ13724 837 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 KIF6Q6ZMV9 814 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 GOLGA6L3A6NEY3 463 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
CSDE1-204ENST00000369530 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-204ENST00000369530 RNF216Q9NWF9 866 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-204ENST00000369530 SHTN1A0MZ66 631 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
CSDE1-204ENST00000369530 ZBTB40Q9NUA8 1239 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 GPRC5DQ9NZD1 345 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 MYH4Q9Y623 1939 aa8.47□□□□□ -1.05
CSDE1-204ENST00000369530 C8orf34Q49A92 452 aa8.46□□□□□ -1.05
CSDE1-204ENST00000369530 ZNF830Q96NB3 372 aaPredicted RBP8.46□□□□□ -1.05
CSDE1-204ENST00000369530 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
CSDE1-204ENST00000369530 MYD88Q99836 296 aa8.46□□□□□ -1.06
CSDE1-204ENST00000369530 NMRK2Q9NPI5 230 aa8.46□□□□□ -1.06
CSDE1-204ENST00000369530 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
CSDE1-204ENST00000369530 GAKO14976 1311 aa8.46□□□□□ -1.06
CSDE1-204ENST00000369530 CCDC24Q8N4L8 307 aa8.46□□□□□ -1.06
CSDE1-204ENST00000369530 PPP1R9BQ96SB3 815 aa8.46□□□□□ -1.06
CSDE1-204ENST00000369530 DYNC1I1O14576 645 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 CXCL9Q07325 125 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 HS1BP3Q53T59 392 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-204ENST00000369530 NPM2Q86SE8 214 aaKnown RBP8.45□□□□□ -1.06
CSDE1-204ENST00000369530 TESPA1A2RU30 521 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-204ENST00000369530 IGSF3O75054 1194 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 TOMM70O94826 608 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 YY1P25490 414 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 GRIK5Q16478 980 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 CCDC94Q9BW85 323 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-204ENST00000369530 ARID4AP29374 1257 aaPredicted RBP8.45□□□□□ -1.06
CSDE1-204ENST00000369530 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 TAOK3Q9H2K8 898 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 GPR108Q9NPR9 543 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 RCAN3Q9UKA8 241 aa8.45□□□□□ -1.06
CSDE1-204ENST00000369530 F6X3S4 739 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 ATP5J2-PTCD1G3V325 749 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 SASH1O94885 1247 aa8.44□□□□□ -1.06
CSDE1-204ENST00000369530 ZC3H15Q8WU90 426 aaKnown RBP8.44□□□□□ -1.06
CSDE1-204ENST00000369530 BICC1Q9H694 974 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms