RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ESR2Q92731 530 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 KRT9P35527 623 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 UAP1Q16222 522 aaPredicted RBP20.62■□□□□ 0.89
SNX27-202ENST00000368841 BIN2Q9UBW5 565 aaPredicted RBP20.62■□□□□ 0.89
SNX27-202ENST00000368841 RAPGEF1Q13905 1077 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 RAB3GAP1Q15042 981 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
SNX27-202ENST00000368841 OGFOD1Q8N543 542 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 GUCA1BQ9UMX6 200 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNX27-202ENST00000368841 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
SNX27-202ENST00000368841 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
SNX27-202ENST00000368841 ERCC3P19447 782 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
SNX27-202ENST00000368841 C6orf163Q5TEZ5 329 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 RTL1A6NKG5 1358 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 RHOXF2BP0C7M4 288 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 SYT1P21579 422 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 RHOXF2Q9BQY4 288 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 IFI16Q16666 785 aaKnown RBP20.61■□□□□ 0.89
SNX27-202ENST00000368841 CCDC65Q8IXS2 484 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 PPP1R9BQ96SB3 815 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 CCDC141Q6ZP82 1450 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 SH3BP5O60239 455 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 FAM160A1Q05DH4 1040 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 IDI1Q13907 227 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 PRKG1Q13976 671 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 RASA3Q14644 834 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 CCDC186Q7Z3E2 898 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 KIF14Q15058 1648 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 SKILP12757 684 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 KRT2P35908 639 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 RNASE9P60153 205 aaKnown RBP20.61■□□□□ 0.89
SNX27-202ENST00000368841 TFCP2Q12800 502 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 ATRIPQ8WXE1 791 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 DACT1Q9NYF0 836 aa20.61■□□□□ 0.89
SNX27-202ENST00000368841 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 RRP36Q96EU6 259 aaKnown RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 GPCPD1Q9NPB8 672 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 TFCP2L1Q9NZI6 479 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 TAF12Q16514 161 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 CFAP58Q5T655 872 aa20.6■□□□□ 0.89
SNX27-202ENST00000368841 ERCC5P28715 1186 aaPredicted RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 BMS1Q14692 1282 aaKnown RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 FNBP4Q8N3X1 1017 aaPredicted RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
SNX27-202ENST00000368841 SELENOOQ9BVL4 669 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 KRT24Q2M2I5 525 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 ZMYND15Q9H091 742 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 KCNK9Q9NPC2 374 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 HMG20BQ9P0W2 317 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 DDX39AO00148 427 aaKnown RBP20.59■□□□□ 0.89
SNX27-202ENST00000368841 CCDC24Q8N4L8 307 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 EFCAB5A4FU69 1503 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 TMCO4Q5TGY1 634 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 LRRC27Q9C0I9 530 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
SNX27-202ENST00000368841 NUCB1Q02818 461 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 BBXQ8WY36 941 aaPredicted RBP20.59■□□□□ 0.89
SNX27-202ENST00000368841 CTNND2Q9UQB3 1225 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
SNX27-202ENST00000368841 RASAL2Q9UJF2 1139 aa20.59■□□□□ 0.89
SNX27-202ENST00000368841 CYLC1P35663 651 aaPredicted RBP20.58■□□□□ 0.89
SNX27-202ENST00000368841 TIGD1Q96MW7 591 aa20.58■□□□□ 0.89
SNX27-202ENST00000368841 CCT6AP40227 531 aaKnown RBP20.58■□□□□ 0.89
SNX27-202ENST00000368841 SF3A3Q12874 501 aaKnown RBP eCLIP20.58■□□□□ 0.89
SNX27-202ENST00000368841 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
SNX27-202ENST00000368841 LRSAM1Q6UWE0 723 aa20.58■□□□□ 0.89
SNX27-202ENST00000368841 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
SNX27-202ENST00000368841 CTAGE15A4D2H0 777 aa20.58■□□□□ 0.88
SNX27-202ENST00000368841 CTAGE8P0CG41 777 aa20.58■□□□□ 0.88
SNX27-202ENST00000368841 CTAGE6Q86UF2 777 aa20.58■□□□□ 0.88
SNX27-202ENST00000368841 CTAGE4Q8IX94 777 aa20.58■□□□□ 0.88
SNX27-202ENST00000368841 BACH1O14867 736 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 CPA1P15085 419 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 CCDC129Q6ZRS4 1044 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 ZNF174Q15697 407 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 PPP1R21Q6ZMI0 780 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 IMPG2Q9BZV3 1241 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 TLDC2A0PJX2 215 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 UBAP1LF5GYI3 381 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 NEMFO60524 1076 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 ESYT1Q9BSJ8 1104 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
SNX27-202ENST00000368841 SORBS3O60504 671 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 MRPS27Q92552 414 aaKnown RBP20.57■□□□□ 0.88
SNX27-202ENST00000368841 C6orf50Q9HD87 102 aa20.57■□□□□ 0.88
SNX27-202ENST00000368841 CCDC172P0C7W6 258 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 SREK1Q8WXA9 508 aaKnown RBP20.56■□□□□ 0.88
SNX27-202ENST00000368841 ZBTB16Q05516 673 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 TTC12Q9H892 705 aaPredicted RBP20.56■□□□□ 0.88
SNX27-202ENST00000368841 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
SNX27-202ENST00000368841 GRM8O00222 908 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms