RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 UTP14AQ9BVJ6 771 aaKnown RBP13.93□□□□□ -0.18
TUBE1-201ENST00000368657 ZC3H12CQ9C0D7 883 aaKnown RBP13.93□□□□□ -0.18
TUBE1-201ENST00000368657 ANGEL1Q9UNK9 670 aaKnown RBP13.93□□□□□ -0.18
TUBE1-201ENST00000368657 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
TUBE1-201ENST00000368657 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
TUBE1-201ENST00000368657 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
TUBE1-201ENST00000368657 PRKG1Q13976 671 aa13.92□□□□□ -0.18
TUBE1-201ENST00000368657 POLLQ9UGP5 575 aa13.92□□□□□ -0.18
TUBE1-201ENST00000368657 KIF22Q14807 665 aa13.91□□□□□ -0.18
TUBE1-201ENST00000368657 MAP3K11Q16584 847 aa13.91□□□□□ -0.18
TUBE1-201ENST00000368657 GIGYF2Q6Y7W6 1299 aaKnown RBP13.91□□□□□ -0.18
TUBE1-201ENST00000368657 GMLQ99445 158 aa13.91□□□□□ -0.18
TUBE1-201ENST00000368657 ZNF646O15015 1829 aaPredicted RBP13.91□□□□□ -0.18
TUBE1-201ENST00000368657 DUOX1Q9NRD9 1551 aa13.91□□□□□ -0.18
TUBE1-201ENST00000368657 BCAMP50895 628 aa13.9□□□□□ -0.18
TUBE1-201ENST00000368657 MTFR1Q15390 333 aa13.9□□□□□ -0.18
TUBE1-201ENST00000368657 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
TUBE1-201ENST00000368657 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
TUBE1-201ENST00000368657 PTPN18Q99952 460 aa13.9□□□□□ -0.18
TUBE1-201ENST00000368657 ZFYVE28Q9HCC9 887 aa13.9□□□□□ -0.18
TUBE1-201ENST00000368657 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
TUBE1-201ENST00000368657 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
TUBE1-201ENST00000368657 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
TUBE1-201ENST00000368657 TAF1P21675 1872 aa13.89□□□□□ -0.19
TUBE1-201ENST00000368657 DDX60Q8IY21 1712 aaKnown RBP13.88□□□□□ -0.19
TUBE1-201ENST00000368657 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
TUBE1-201ENST00000368657 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
TUBE1-201ENST00000368657 MMP14P50281 582 aa13.88□□□□□ -0.19
TUBE1-201ENST00000368657 TDHQ8IZJ6 230 aa13.88□□□□□ -0.19
TUBE1-201ENST00000368657 ANKRD36CQ5JPF3 1778 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 HAX1O00165 279 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 WDHD1O75717 1129 aaPredicted RBP13.87□□□□□ -0.19
TUBE1-201ENST00000368657 GPSM2P81274 684 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 TBC1D16Q8TBP0 767 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 RNF208Q9H0X6 261 aa13.87□□□□□ -0.19
TUBE1-201ENST00000368657 LAMB1P07942 1786 aa13.86□□□□□ -0.19
TUBE1-201ENST00000368657 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
TUBE1-201ENST00000368657 WNT10BO00744 389 aa13.86□□□□□ -0.19
TUBE1-201ENST00000368657 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
TUBE1-201ENST00000368657 CCL5P13501 91 aa13.86□□□□□ -0.19
TUBE1-201ENST00000368657 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-201ENST00000368657 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
TUBE1-201ENST00000368657 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-201ENST00000368657 RRP7AQ9Y3A4 280 aaKnown RBP13.86□□□□□ -0.19
TUBE1-201ENST00000368657 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
TUBE1-201ENST00000368657 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
TUBE1-201ENST00000368657 HCLS1P14317 486 aaPredicted RBP13.85□□□□□ -0.19
TUBE1-201ENST00000368657 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
TUBE1-201ENST00000368657 U2AF1L4Q8WU68 220 aaKnown RBP13.85□□□□□ -0.19
TUBE1-201ENST00000368657 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
TUBE1-201ENST00000368657 GUCD1Q96NT3 240 aa13.85□□□□□ -0.19
TUBE1-201ENST00000368657 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 SGPL1O95470 568 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 HOXD10P28358 340 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 GRK4P32298 578 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 UBXN2AP68543 259 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 LACTBP83111 547 aaPredicted RBP13.84□□□□□ -0.19
TUBE1-201ENST00000368657 TRIM47Q96LD4 638 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 LRRC37AA6NMS7 1700 aa13.84□□□□□ -0.19
TUBE1-201ENST00000368657 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
TUBE1-201ENST00000368657 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
TUBE1-201ENST00000368657 PANK3Q9H999 370 aa13.83□□□□□ -0.2
TUBE1-201ENST00000368657 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
TUBE1-201ENST00000368657 IRS2Q9Y4H2 1338 aa13.83□□□□□ -0.2
TUBE1-201ENST00000368657 MYL6BP14649 208 aa13.82□□□□□ -0.2
TUBE1-201ENST00000368657 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
TUBE1-201ENST00000368657 SUPT20HL1Q3ZLR7 823 aa13.82□□□□□ -0.2
TUBE1-201ENST00000368657 BIN2Q9UBW5 565 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-201ENST00000368657 FZD1Q9UP38 647 aa13.82□□□□□ -0.2
TUBE1-201ENST00000368657 ARIH1Q9Y4X5 557 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-201ENST00000368657 TLR2O60603 784 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 GJA5P36382 358 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 ANKRD13AQ8IZ07 590 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
TUBE1-201ENST00000368657 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
TUBE1-201ENST00000368657 MS4A4AQ96JQ5 239 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 ARHGAP39Q9C0H5 1083 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 SRRDQ9UH36 339 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
TUBE1-201ENST00000368657 RIPOR2Q9Y4F9 1068 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
TUBE1-201ENST00000368657 TMEM265A0A087WTH1 108 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 TFRCP02786 760 aaKnown RBP13.8□□□□□ -0.2
TUBE1-201ENST00000368657 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 HSP90AB3PQ58FF7 597 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
TUBE1-201ENST00000368657 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 UBE2OQ9C0C9 1292 aaKnown RBP13.8□□□□□ -0.2
TUBE1-201ENST00000368657 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 PPP2R3BQ9Y5P8 575 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 LAMB2P55268 1798 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
TUBE1-201ENST00000368657 TTC28Q96AY4 2481 aa13.8□□□□□ -0.2
TUBE1-201ENST00000368657 MUC3AQ02505 3323 aa13.79□□□□□ -0.2
TUBE1-201ENST00000368657 GTF2A2P52657 109 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms