RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CRAMP1Q96RY5 1269 aa9.71□□□□□ -0.85
SSR2-202ENST00000368311 GTPBP4Q9BZE4 634 aaKnown RBP9.71□□□□□ -0.85
SSR2-202ENST00000368311 KDRP35968 1356 aa9.71□□□□□ -0.85
SSR2-202ENST00000368311 ITGA6P23229 1130 aa9.71□□□□□ -0.85
SSR2-202ENST00000368311 GINM1Q9NU53 330 aa9.71□□□□□ -0.85
SSR2-202ENST00000368311 POLR1AO95602 1720 aaPredicted RBP9.71□□□□□ -0.85
SSR2-202ENST00000368311 LMBR1LQ6UX01 489 aa9.71□□□□□ -0.86
SSR2-202ENST00000368311 ALDH1A1P00352 501 aa9.71□□□□□ -0.86
SSR2-202ENST00000368311 MIS18AQ9NYP9 233 aa9.71□□□□□ -0.86
SSR2-202ENST00000368311 TSPY2A6NKD2 308 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 EYA2O00167 538 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 LMNB1P20700 586 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 MFSD6Q6ZSS7 791 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 SMC1BQ8NDV3 1235 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 ERMNQ8TAM6 284 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 SWAP70Q9UH65 585 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 SMC3Q9UQE7 1217 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 CDC37L1Q7L3B6 337 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 LZTS2Q9BRK4 669 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 SLKQ9H2G2 1235 aaPredicted RBP9.7□□□□□ -0.86
SSR2-202ENST00000368311 MTIF3Q9H2K0 278 aaKnown RBP9.7□□□□□ -0.86
SSR2-202ENST00000368311 TNS2Q63HR2 1409 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 PCP11498 1178 aaKnown RBP9.7□□□□□ -0.86
SSR2-202ENST00000368311 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
SSR2-202ENST00000368311 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 USP17L3A6NCW0 530 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 USP17L4A6NCW7 530 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 USP17L1Q7RTZ2 530 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 CCDC150Q8NCX0 1101 aa9.7□□□□□ -0.86
SSR2-202ENST00000368311 CCDC85AQ96PX6 553 aaPredicted RBP9.7□□□□□ -0.86
SSR2-202ENST00000368311 MX1P20591 662 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 DHX36Q9H2U1 1008 aaKnown RBP9.69□□□□□ -0.86
SSR2-202ENST00000368311 ABCC6O95255 1503 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 UBXN2AP68543 259 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 STIM1Q13586 685 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 PODNQ7Z5L7 613 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 HACE1Q8IYU2 909 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 TXLNBQ8N3L3 684 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 TRIM44Q96DX7 344 aaPredicted RBP9.69□□□□□ -0.86
SSR2-202ENST00000368311 CHL1O00533 1208 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 ZBTB7AO95365 584 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 DHX8Q14562 1220 aaKnown RBP9.69□□□□□ -0.86
SSR2-202ENST00000368311 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 NOD1Q9Y239 953 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 BMP15O95972 392 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 MCTP1Q6DN14 999 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 SP8Q8IXZ3 490 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 UBR1Q8IWV7 1749 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 M0QZ92 97 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 CHURC1Q8WUH1 139 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 PPP2R3BQ9Y5P8 575 aa9.69□□□□□ -0.86
SSR2-202ENST00000368311 EPS15P42566 896 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 USP37Q86T82 979 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 ZNF496Q96IT1 587 aaPredicted RBP9.68□□□□□ -0.86
SSR2-202ENST00000368311 NBPF3Q9H094 633 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 DACH1Q9UI36 760 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 MINDY4BA8MYZ0 360 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 PIGBQ92521 554 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 CCDC17Q96LX7 622 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 CIAO1O76071 339 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 PPP2R5BQ15173 497 aa9.68□□□□□ -0.86
SSR2-202ENST00000368311 PTMAP06454 111 aaKnown RBP9.67□□□□□ -0.86
SSR2-202ENST00000368311 FAM161AQ3B820 660 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
SSR2-202ENST00000368311 YY1P25490 414 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 ATP8B2P98198 1209 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 RANBP6O60518 1105 aaKnown RBP9.67□□□□□ -0.86
SSR2-202ENST00000368311 KCNH4Q9UQ05 1017 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 SLC12A7Q9Y666 1083 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 EXOC8Q8IYI6 725 aa9.67□□□□□ -0.86
SSR2-202ENST00000368311 ARPP21Q9UBL0 812 aaPredicted RBP9.67□□□□□ -0.86
SSR2-202ENST00000368311 FDX1P10109 184 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 NCOA7Q8NI08 942 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 RABGAP1Q9Y3P9 1069 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 RABEP1Q15276 862 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 FASTKD5Q7L8L6 764 aaKnown RBP9.66□□□□□ -0.86
SSR2-202ENST00000368311 NBPF11Q86T75 865 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 MCF2L2Q86YR7 1114 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 COA7Q96BR5 231 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 ZNF341Q9BYN7 854 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 GPR108Q9NPR9 543 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 ZNF804BA4D1E1 1349 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 CDHR2Q9BYE9 1310 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 SOCS7O14512 581 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
SSR2-202ENST00000368311 FAM13BQ9NYF5 915 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 AOX1Q06278 1338 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 NKX1-1Q15270 411 aaPredicted RBP9.66□□□□□ -0.86
SSR2-202ENST00000368311 CCDC73Q6ZRK6 1079 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
SSR2-202ENST00000368311 SMC2O95347 1197 aa9.65□□□□□ -0.86
SSR2-202ENST00000368311 IARSP41252 1262 aaKnown RBP9.65□□□□□ -0.86
SSR2-202ENST00000368311 IRX6P78412 446 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms