RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PTPDC1A2A3K4 754 aa21.33■■□□□ 1.01
UBQLN4-201ENST00000368309 SOS2Q07890 1332 aaPredicted RBP21.33■■□□□ 1
UBQLN4-201ENST00000368309 HSP90AA2PQ14568 343 aaPredicted RBP21.33■■□□□ 1
UBQLN4-201ENST00000368309 PIGBQ92521 554 aa21.33■■□□□ 1
UBQLN4-201ENST00000368309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 DNTTIP2Q5QJE6 756 aaKnown RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 ANO6Q4KMQ2 910 aa21.31■■□□□ 1
UBQLN4-201ENST00000368309 FAM200AQ8TCP9 573 aa21.31■■□□□ 1
UBQLN4-201ENST00000368309 ZSCAN16Q9H4T2 348 aaPredicted RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
UBQLN4-201ENST00000368309 PDIA3P30101 505 aaKnown RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 ZAP70P43403 619 aa21.31■■□□□ 1
UBQLN4-201ENST00000368309 IFIT5Q13325 482 aaKnown RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 KIF6Q6ZMV9 814 aa21.31■■□□□ 1
UBQLN4-201ENST00000368309 LLPHQ9BRT6 129 aaKnown RBP21.31■■□□□ 1
UBQLN4-201ENST00000368309 HLFQ16534 295 aa21.3■■□□□ 1
UBQLN4-201ENST00000368309 DDX19AQ9NUU7 478 aaKnown RBP21.3■■□□□ 1
UBQLN4-201ENST00000368309 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
UBQLN4-201ENST00000368309 CFAP45Q9UL16 551 aa21.3■■□□□ 1
UBQLN4-201ENST00000368309 AKAP2Q9Y2D5 859 aa21.3■■□□□ 1
UBQLN4-201ENST00000368309 CLSTN2Q9H4D0 955 aa21.29■■□□□ 1
UBQLN4-201ENST00000368309 AGXT2Q9BYV1 514 aa21.29■■□□□ 1
UBQLN4-201ENST00000368309 UQCRHLA0A096LP55 91 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 UQCRHP07919 91 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 ADD1P35611 737 aaKnown RBP21.28■■□□□ 1
UBQLN4-201ENST00000368309 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
UBQLN4-201ENST00000368309 FOXP2O15409 715 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 PCCAP05165 728 aaPredicted RBP21.28■■□□□ 1
UBQLN4-201ENST00000368309 NOLC1Q14978 699 aaKnown RBP eCLIP21.28■■□□□ 1
UBQLN4-201ENST00000368309 RAB11FIP4Q86YS3 637 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 CBX8Q9HC52 389 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 ZNF335Q9H4Z2 1342 aaPredicted RBP21.28■■□□□ 1
UBQLN4-201ENST00000368309 FGAP02671 866 aa21.28■■□□□ 1
UBQLN4-201ENST00000368309 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
UBQLN4-201ENST00000368309 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
UBQLN4-201ENST00000368309 HMGN5P82970 282 aaKnown RBP21.27■■□□□ 1
UBQLN4-201ENST00000368309 TRIM28Q13263 835 aaKnown RBP21.27■■□□□ 1
UBQLN4-201ENST00000368309 TNS2Q63HR2 1409 aa21.27■■□□□ 1
UBQLN4-201ENST00000368309 STARD3NLO95772 234 aa21.27■□□□□ 0.99
UBQLN4-201ENST00000368309 TERF1P54274 439 aa21.27■□□□□ 0.99
UBQLN4-201ENST00000368309 METTL24Q5JXM2 366 aa21.27■□□□□ 0.99
UBQLN4-201ENST00000368309 LDHAL6AQ6ZMR3 332 aa21.27■□□□□ 0.99
UBQLN4-201ENST00000368309 TJP1Q07157 1748 aa21.27■□□□□ 0.99
UBQLN4-201ENST00000368309 SASS6Q6UVJ0 657 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 USP28Q96RU2 1077 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 GREM2Q9H772 168 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 PARP4Q9UKK3 1724 aaKnown RBP21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 CSF1RP07333 972 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 OTUD7BQ6GQQ9 843 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 NAA16Q6N069 864 aaPredicted RBP21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 DNAJC25Q9H1X3 360 aa21.26■□□□□ 0.99
UBQLN4-201ENST00000368309 NUP188Q5SRE5 1749 aa21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 ITGA6P23229 1130 aa21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 ZNF274Q96GC6 653 aaPredicted RBP21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 RRP9O43818 475 aaKnown RBP21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 IMMTQ16891 758 aaKnown RBP21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 SYTL4Q96C24 671 aaPredicted RBP21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 BTG4Q9NY30 223 aa21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 ATP2B3Q16720 1220 aa21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 GIGYF2Q6Y7W6 1299 aaKnown RBP21.25■□□□□ 0.99
UBQLN4-201ENST00000368309 CCAR1Q8IX12 1150 aaKnown RBP21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 KCNF1Q9H3M0 494 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 CTNNA3Q9UI47 895 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 FDPSP14324 419 aaKnown RBP21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 LRRFIP1Q32MZ4 808 aaKnown RBP21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 RBM43Q6ZSC3 357 aaKnown RBP21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 TTLL11Q8NHH1 800 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 FAM13BQ9NYF5 915 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 KIF3AQ9Y496 699 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 UBR2Q8IWV8 1755 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 MAP3K15Q6ZN16 1313 aa21.24■□□□□ 0.99
UBQLN4-201ENST00000368309 CNNM1Q9NRU3 951 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 RCOR1Q9UKL0 485 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 RIPOR2Q9Y4F9 1068 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 ZNF165P49910 485 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 NLRP10Q86W26 655 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 ZFYP08048 801 aaPredicted RBP21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 MCAMP43121 646 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 TICAM2Q86XR7 235 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 APPBP2Q92624 585 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 PYCARDQ9ULZ3 195 aa21.23■□□□□ 0.99
UBQLN4-201ENST00000368309 GPAA1O43292 621 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 PRC1O43663 620 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 PLA2G12BQ9BX93 195 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 GOLPH3LQ9H4A5 285 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 SALL1Q9NSC2 1324 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 A0A087WWV3 80 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 ILDR1Q86SU0 546 aaPredicted RBP21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 FBXO3Q9UK99 471 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 TAOK2Q9UL54 1235 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 GJB4Q9NTQ9 266 aa21.22■□□□□ 0.99
UBQLN4-201ENST00000368309 ME1P48163 572 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 TRIM5Q9C035 493 aa21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
UBQLN4-201ENST00000368309 DENND2AQ9ULE3 1009 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms