RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 FOSL1P15407 271 aa7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 ITGB5P18084 799 aa7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 COL13A1Q5TAT6 717 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 FBXL6Q8N531 539 aa7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 OR13H1Q8NG92 308 aa7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 TFIP11Q9UBB9 837 aaKnown RBP7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 MAFBQ9Y5Q3 323 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-201ENST00000368287 PRNPP04156 253 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 EPHA1P21709 976 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 MAP4P27816 1152 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 WEE1P30291 646 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 TRIP4Q15650 581 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 ANKMY2Q8IV38 441 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 COL26A1Q96A83 441 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 KLHDC7BQ96G42 594 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 RASSF4Q9H2L5 321 aa7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 SH2B1Q9NRF2 756 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-201ENST00000368287 F13BP05160 661 aa7.15□□□□□ -1.26
ECHDC1-201ENST00000368287 PTPRAP18433 802 aa7.15□□□□□ -1.26
ECHDC1-201ENST00000368287 SCNN1AP37088 669 aa7.15□□□□□ -1.26
ECHDC1-201ENST00000368287 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
ECHDC1-201ENST00000368287 RUSC1Q9BVN2 902 aa7.15□□□□□ -1.26
ECHDC1-201ENST00000368287 USP17L15C9J2P7 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L10C9JJH3 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L13C9JLJ4 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L12C9JPN9 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L11C9JVI0 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L21D6R901 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L18D6R9N7 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L22D6RA61 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L17D6RBQ6 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L19D6RCP7 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L20D6RJB6 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 UBAP1LF5GYI3 381 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 RXRBP28702 533 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 USP17L24Q0WX57 530 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 ADAMTSL4Q6UY14 1074 aa7.14□□□□□ -1.27
ECHDC1-201ENST00000368287 NLRP12P59046 1061 aa7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 FLIIQ13045 1269 aa7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 SGO2Q562F6 1265 aa7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 TTC39BQ5VTQ0 682 aaPredicted RBP7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 NFXL1Q6ZNB6 911 aa7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
ECHDC1-201ENST00000368287 FAM196BA6NMK8 535 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 H3BRJ5 948 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 CABP4P57796 275 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 PIP4K2BP78356 416 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 COX20Q5RI15 118 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 AGBL5Q8NDL9 886 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 FLCNQ8NFG4 579 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 WNT8BQ93098 351 aa7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 BSDC1Q9NW68 430 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-201ENST00000368287 UBTFP17480 764 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 COL19A1Q14993 1142 aa7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 FBLN7Q53RD9 439 aa7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 ETFBKMTQ8IXQ9 262 aa7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 OSGEPQ9NPF4 335 aa7.11□□□□□ -1.27
ECHDC1-201ENST00000368287 KIF4AO95239 1232 aa7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 KANK4Q5T7N3 995 aaPredicted RBP7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 NCAPG2Q86XI2 1143 aa7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 PIK3R5Q8WYR1 880 aa7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 ADAM19Q9H013 955 aa7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 ZMYND15Q9H091 742 aa7.1□□□□□ -1.27
ECHDC1-201ENST00000368287 A6NJR5 290 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 DBX1A6NMT0 343 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 CYP26A1O43174 497 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 BRD2P25440 801 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 NFKBIBQ15653 356 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 ZNF124Q15973 351 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 PAOXQ6QHF9 649 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 C14orf37Q86TY3 774 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 POP1Q99575 1024 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 FAM13BQ9NYF5 915 aa7.09□□□□□ -1.27
ECHDC1-201ENST00000368287 FAM95CA0A1B0GW59 222 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 MEGF11A6BM72 1044 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 NUTM2GQ5VZR2 741 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 C12orf50Q8NA57 414 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 SLC7A3Q8WY07 619 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 GLMNQ92990 594 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 ARXQ96QS3 562 aa7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 FNDC3AQ9Y2H6 1198 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-201ENST00000368287 PAPLNO95428 1278 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 SPOCD1Q6ZMY3 1216 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 CEP120Q8N960 986 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 PAK6Q9NQU5 681 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-201ENST00000368287 CYP2E1P05181 493 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-201ENST00000368287 ARL4DP49703 201 aa7.06□□□□□ -1.28
ECHDC1-201ENST00000368287 FKBP5Q13451 457 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-201ENST00000368287 ABI2Q9NYB9 513 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-201ENST00000368287 USP11P51784 963 aa7.05□□□□□ -1.28
ECHDC1-201ENST00000368287 PKN1Q16512 942 aa7.05□□□□□ -1.28
ECHDC1-201ENST00000368287 TBC1D32Q96NH3 1257 aa7.05□□□□□ -1.28
ECHDC1-201ENST00000368287 CYP4F12Q9HCS2 524 aa7.05□□□□□ -1.28
ECHDC1-201ENST00000368287 BIN1O00499 593 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms