RNA–Protein interactions for RNA: ENST00000368259.6

CCT3-204, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-204ENST00000368259 CLASRPQ8N2M8 674 aaKnown RBP15.22■□□□□ 0.03
CCT3-204ENST00000368259 GBP3Q9H0R5 595 aa15.22■□□□□ 0.03
CCT3-204ENST00000368259 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
CCT3-204ENST00000368259 USP31Q70CQ4 1352 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 H3BQV1 296 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 IDI1Q13907 227 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 MCM10Q7L590 875 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 HDXQ7Z353 690 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 CCDC91Q7Z6B0 441 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 XPO4Q9C0E2 1151 aaKnown RBP15.21■□□□□ 0.03
CCT3-204ENST00000368259 RAB21Q9UL25 225 aa15.21■□□□□ 0.03
CCT3-204ENST00000368259 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.02
CCT3-204ENST00000368259 SRGAP3O43295 1099 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
CCT3-204ENST00000368259 CPA1P15085 419 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 ADALQ6DHV7 355 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 TMC6Q7Z403 805 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 FMR1NBQ8N0W7 255 aaPredicted RBP15.2■□□□□ 0.02
CCT3-204ENST00000368259 LRRN4CLQ8ND94 238 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 CARD6Q9BX69 1037 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 MED4Q9NPJ6 270 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 TECPR2O15040 1411 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 HOXB7P09629 217 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 LMAN1P49257 510 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 LONRF2Q1L5Z9 754 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 FAM173BQ6P4H8 233 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 NME9Q86XW9 330 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
CCT3-204ENST00000368259 BRF1Q92994 677 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
CCT3-204ENST00000368259 TRERF1Q96PN7 1200 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 KIAA1468Q9P260 1216 aa15.2■□□□□ 0.02
CCT3-204ENST00000368259 TOPAZ1Q8N9V7 1692 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 TRIM66O15016 1216 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 HMGB1P09429 215 aaKnown RBP15.19■□□□□ 0.02
CCT3-204ENST00000368259 NLRP12P59046 1061 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 PPP2R3AQ06190 1150 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
CCT3-204ENST00000368259 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
CCT3-204ENST00000368259 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.026e-9■□□□□ 10
CCT3-204ENST00000368259 LARP6Q9BRS8 491 aaKnown RBP15.19■□□□□ 0.02
CCT3-204ENST00000368259 MRC1P22897 1456 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 WASLO00401 505 aaPredicted RBP15.18■□□□□ 0.02
CCT3-204ENST00000368259 NPHP1O15259 732 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 KIF1CO43896 1103 aaKnown RBP15.18■□□□□ 0.02
CCT3-204ENST00000368259 USP8P40818 1118 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 PSEN1P49768 467 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 PARD6BQ9BYG5 372 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 IFNKQ9P0W0 207 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 LCMT1Q9UIC8 334 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 NCKAP5LQ9HCH0 1330 aa15.18■□□□□ 0.02
CCT3-204ENST00000368259 STX10O60499 249 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 GSCP56915 257 aaPredicted RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 MMS22LQ6ZRQ5 1243 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 PAXIP1Q6ZW49 1069 aaPredicted RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 CEP112Q8N8E3 955 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 EIF3CLB5ME19 914 aaKnown RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 SEC31AO94979 1220 aaKnown RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 YEATS4O95619 227 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 EIF5P55010 431 aaKnown RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 GORABQ5T7V8 394 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 KCNG4Q8TDN1 519 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 EIF3CQ99613 913 aaKnown RBP15.17■□□□□ 0.02
CCT3-204ENST00000368259 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 VIPAS39Q9H9C1 493 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 RTEL1Q9NZ71 1219 aa15.17■□□□□ 0.02
CCT3-204ENST00000368259 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 SOX12O15370 315 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 PFKFB2O60825 505 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 NUTM2GQ5VZR2 741 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 FSIP1Q8NA03 581 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
CCT3-204ENST00000368259 A0A087WUV0 522 aaPredicted RBP15.15■□□□□ 0.02
CCT3-204ENST00000368259 VWA3AA6NCI4 1184 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 FANCCQ00597 558 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 NCAPHQ15003 741 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
CCT3-204ENST00000368259 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 PPFIA4O75335 1185 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 BEND6Q5SZJ8 279 aaPredicted RBP15.15■□□□□ 0.02
CCT3-204ENST00000368259 SRGAP1Q7Z6B7 1085 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 VSTM4Q8IW00 320 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 SLIT1O75093 1534 aa15.15■□□□□ 0.02
CCT3-204ENST00000368259 MAP4K4O95819 1239 aaPredicted RBP15.14■□□□□ 0.01
CCT3-204ENST00000368259 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
CCT3-204ENST00000368259 FBLN1P23142 703 aa15.14■□□□□ 0.01
CCT3-204ENST00000368259 RRS1Q15050 365 aaKnown RBP15.14■□□□□ 0.01
CCT3-204ENST00000368259 PACS2Q86VP3 889 aa15.14■□□□□ 0.01
CCT3-204ENST00000368259 ELOA2Q8IYF1 753 aaPredicted RBP15.14■□□□□ 0.01
CCT3-204ENST00000368259 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
CCT3-204ENST00000368259 KIFC2Q96AC6 838 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms