RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
VTA1-201ENST00000367621 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 PNPLA7Q6ZV29 1317 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 IL15P40933 162 aaPredicted RBP11.68□□□□□ -0.54
VTA1-201ENST00000367621 IFIT5Q13325 482 aaKnown RBP11.68□□□□□ -0.54
VTA1-201ENST00000367621 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
VTA1-201ENST00000367621 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 PI4K2BQ8TCG2 481 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
VTA1-201ENST00000367621 AOX1Q06278 1338 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 DDR1Q08345 913 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 NBPF5PQ86XG9 351 aaPredicted RBP11.67□□□□□ -0.54
VTA1-201ENST00000367621 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
VTA1-201ENST00000367621 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 GPR108Q9NPR9 543 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
VTA1-201ENST00000367621 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
VTA1-201ENST00000367621 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 ARHGAP33O14559 1287 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 SDSP20132 328 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 TNNI3KQ59H18 835 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 TPTE2Q6XPS3 522 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 AACSQ86V21 672 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 VGLL2Q8N8G2 317 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
VTA1-201ENST00000367621 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
VTA1-201ENST00000367621 FPGT-TNNI3KV9GXZ4 949 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
VTA1-201ENST00000367621 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
VTA1-201ENST00000367621 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 POLRMTO00411 1230 aaKnown RBP11.65□□□□□ -0.54
VTA1-201ENST00000367621 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
VTA1-201ENST00000367621 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 FLAD1Q8NFF5 587 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
VTA1-201ENST00000367621 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
VTA1-201ENST00000367621 RIC1Q4ADV7 1423 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
VTA1-201ENST00000367621 LRP5O75197 1615 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 SERPINB2P05120 415 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 IFIT2P09913 472 aaKnown RBP11.64□□□□□ -0.55
VTA1-201ENST00000367621 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 COL4A1P02462 1669 aa11.64□□□□□ -0.55
VTA1-201ENST00000367621 TK2O00142 265 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 BAG6P46379 1132 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 DBNDD2Q9BQY9 259 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
VTA1-201ENST00000367621 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
VTA1-201ENST00000367621 ZNF609O15014 1411 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
VTA1-201ENST00000367621 FGFR2P21802 821 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
VTA1-201ENST00000367621 TIMM10P62072 90 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
VTA1-201ENST00000367621 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 CDC45O75419 566 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 PPP1R37O75864 691 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 GLRX3O76003 335 aaKnown RBP11.61□□□□□ -0.55
VTA1-201ENST00000367621 ATP5JP18859 108 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 ADORA1P30542 326 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 CCDC125Q86Z20 511 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
VTA1-201ENST00000367621 CNNM1Q9NRU3 951 aa11.61□□□□□ -0.55
VTA1-201ENST00000367621 PDE8BO95263 885 aa11.6□□□□□ -0.55
VTA1-201ENST00000367621 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
VTA1-201ENST00000367621 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
VTA1-201ENST00000367621 METTL24Q5JXM2 366 aa11.6□□□□□ -0.55
VTA1-201ENST00000367621 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
VTA1-201ENST00000367621 PDGFDQ9GZP0 370 aaPredicted RBP11.6□□□□□ -0.55
VTA1-201ENST00000367621 BSDC1Q9NW68 430 aaPredicted RBP11.6□□□□□ -0.55
VTA1-201ENST00000367621 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
VTA1-201ENST00000367621 LAMB2P55268 1798 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 ERC2O15083 957 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 MMP10P09238 476 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 IGHMBP2P38935 993 aaKnown RBP11.59□□□□□ -0.55
VTA1-201ENST00000367621 RPS8P62241 208 aaKnown RBP11.59□□□□□ -0.55
VTA1-201ENST00000367621 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 HELBQ8NG08 1087 aaPredicted RBP11.59□□□□□ -0.55
VTA1-201ENST00000367621 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 GPATCH3Q96I76 525 aa11.59□□□□□ -0.55
VTA1-201ENST00000367621 AKAP2Q9Y2D5 859 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms