RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 RFX7Q2KHR2 1363 aa17.39■□□□□ 0.37
PRKN-204ENST00000366896 FSD1Q9BTV5 496 aa17.39■□□□□ 0.37
PRKN-204ENST00000366896 TNS1Q9HBL0 1735 aaKnown RBP17.38■□□□□ 0.37
PRKN-204ENST00000366896 KCNQ4P56696 695 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 EPHA10Q5JZY3 1008 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
PRKN-204ENST00000366896 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
PRKN-204ENST00000366896 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 COPS6Q7L5N1 327 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
PRKN-204ENST00000366896 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
PRKN-204ENST00000366896 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
PRKN-204ENST00000366896 TAF1LQ8IZX4 1826 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 FERMT3Q86UX7 667 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
PRKN-204ENST00000366896 FAM173BQ6P4H8 233 aa17.37■□□□□ 0.37
PRKN-204ENST00000366896 INTS5Q6P9B9 1019 aaKnown RBP17.37■□□□□ 0.37
PRKN-204ENST00000366896 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
PRKN-204ENST00000366896 KRT85P78386 507 aa17.36■□□□□ 0.37
PRKN-204ENST00000366896 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
PRKN-204ENST00000366896 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
PRKN-204ENST00000366896 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
PRKN-204ENST00000366896 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 TTC6Q86TZ1 520 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 MYD88Q99836 296 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 COPRSQ9NQ92 184 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 TOB2Q14106 344 aaPredicted RBP17.35■□□□□ 0.37
PRKN-204ENST00000366896 GCKRQ14397 625 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 KRT32Q14532 448 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 TICAM2Q86XR7 235 aa17.35■□□□□ 0.37
PRKN-204ENST00000366896 APBA3O96018 575 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 NDUFB9Q9Y6M9 179 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 CCDC192P0DO97 292 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 U2AF2P26368 475 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRKN-204ENST00000366896 IL6STP40189 918 aaPredicted RBP17.34■□□□□ 0.37
PRKN-204ENST00000366896 TTLL7Q6ZT98 887 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 SPC24Q8NBT2 197 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 METTL22Q9BUU2 404 aaPredicted RBP17.34■□□□□ 0.37
PRKN-204ENST00000366896 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
PRKN-204ENST00000366896 PLSCR1O15162 318 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 CHGBP05060 677 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 ATP5JP18859 108 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 FEZ1Q99689 392 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.36
PRKN-204ENST00000366896 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
PRKN-204ENST00000366896 STK3Q13188 491 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 LIG1P18858 919 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
PRKN-204ENST00000366896 C4BP0C0L5 1744 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 RGPD3A6NKT7 1758 aaPredicted RBP17.32■□□□□ 0.36
PRKN-204ENST00000366896 RGPD4Q7Z3J3 1758 aa17.32■□□□□ 0.36
PRKN-204ENST00000366896 TAF5LO75529 589 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
PRKN-204ENST00000366896 SYCP1Q15431 976 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
PRKN-204ENST00000366896 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
PRKN-204ENST00000366896 PROM2Q8N271 834 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
PRKN-204ENST00000366896 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 FAM200AQ8TCP9 573 aa17.31■□□□□ 0.36
PRKN-204ENST00000366896 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
PRKN-204ENST00000366896 RFX5P48382 616 aaPredicted RBP17.3■□□□□ 0.36
PRKN-204ENST00000366896 NCBP1Q09161 790 aaKnown RBP17.3■□□□□ 0.36
PRKN-204ENST00000366896 TFCP2Q12800 502 aa17.3■□□□□ 0.36
PRKN-204ENST00000366896 PTGS1P23219 599 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 CAMK4Q16566 473 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 CCDC129Q6ZRS4 1044 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
PRKN-204ENST00000366896 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
PRKN-204ENST00000366896 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 NUP62CLQ9H1M0 184 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 OGFRQ9NZT2 677 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 TFIP11Q9UBB9 837 aaKnown RBP17.29■□□□□ 0.36
PRKN-204ENST00000366896 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 ZNF609O15014 1411 aa17.29■□□□□ 0.36
PRKN-204ENST00000366896 JAK2O60674 1132 aa17.28■□□□□ 0.36
PRKN-204ENST00000366896 KIF6Q6ZMV9 814 aa17.28■□□□□ 0.36
PRKN-204ENST00000366896 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
PRKN-204ENST00000366896 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
PRKN-204ENST00000366896 ZBTB3Q9H5J0 574 aa17.28■□□□□ 0.36
PRKN-204ENST00000366896 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
PRKN-204ENST00000366896 SMTNL1A8MU46 457 aa17.27■□□□□ 0.36
PRKN-204ENST00000366896 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
PRKN-204ENST00000366896 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.36
PRKN-204ENST00000366896 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms