RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 RFX7Q2KHR2 1363 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 EYA2O00167 538 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 MCM4P33991 863 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 NUCB2P80303 420 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 GSE1Q14687 1217 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
H3F3A-202ENST00000366814 CDHR2Q9BYE9 1310 aa13.09□□□□□ -0.31
H3F3A-202ENST00000366814 RAB3GAP1Q15042 981 aa13.08□□□□□ -0.32
H3F3A-202ENST00000366814 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
H3F3A-202ENST00000366814 DBNLQ9UJU6 430 aaKnown RBP13.08□□□□□ -0.32
H3F3A-202ENST00000366814 ANKRD31Q8N7Z5 1873 aa13.08□□□□□ -0.32
H3F3A-202ENST00000366814 PALD1Q9ULE6 856 aa13.08□□□□□ -0.32
H3F3A-202ENST00000366814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
H3F3A-202ENST00000366814 KCNJ4P48050 445 aa13.07□□□□□ -0.32
H3F3A-202ENST00000366814 IFIT5Q13325 482 aaKnown RBP13.07□□□□□ -0.32
H3F3A-202ENST00000366814 TICAM2Q86XR7 235 aa13.07□□□□□ -0.32
H3F3A-202ENST00000366814 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
H3F3A-202ENST00000366814 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
H3F3A-202ENST00000366814 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 ZKSCAN1P17029 563 aaPredicted RBP13.06□□□□□ -0.32
H3F3A-202ENST00000366814 GPTP24298 496 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 ATG9AQ7Z3C6 839 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 NLRP10Q86W26 655 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 NYXQ9GZU5 481 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 IL25Q9H293 177 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 CEP126Q9P2H0 1117 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 CCDC171Q6TFL3 1326 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
H3F3A-202ENST00000366814 RNF20Q5VTR2 975 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 TNPO1Q92973 898 aaKnown RBP13.06□□□□□ -0.32
H3F3A-202ENST00000366814 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 HAUS7Q99871 368 aa13.06□□□□□ -0.32
H3F3A-202ENST00000366814 MYH3P11055 1940 aa13.05□□□□□ -0.32
H3F3A-202ENST00000366814 ZNF609O15014 1411 aa13.05□□□□□ -0.32
H3F3A-202ENST00000366814 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
H3F3A-202ENST00000366814 SNRKQ9NRH2 765 aa13.05□□□□□ -0.32
H3F3A-202ENST00000366814 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
H3F3A-202ENST00000366814 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
H3F3A-202ENST00000366814 CSF1RP07333 972 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 LRRFIP1Q32MZ4 808 aaKnown RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 SPEF2Q9C093 1822 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 SRGNP10124 158 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 LRRC24Q50LG9 513 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 GORABQ5T7V8 394 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 STYK1Q6J9G0 422 aa13.04□□□□□ -0.32
H3F3A-202ENST00000366814 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 ZNF594Q96JF6 807 aaPredicted RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
H3F3A-202ENST00000366814 CACNA1SQ13698 1873 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
H3F3A-202ENST00000366814 C21orf2O43822 256 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 PDE8AO60658 829 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 MNX1P50219 401 aaPredicted RBP13.03□□□□□ -0.32
H3F3A-202ENST00000366814 NUBP1P53384 320 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 CTSWP56202 376 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 ERFEQ4G0M1 354 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 CCDC158Q5M9N0 1113 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.03□□□□□ -0.32
H3F3A-202ENST00000366814 FAM227BQ96M60 508 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
H3F3A-202ENST00000366814 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
H3F3A-202ENST00000366814 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
H3F3A-202ENST00000366814 A0A1B0GUL7 405 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 NPR1P16066 1061 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 PSMA5P28066 241 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 PTH1RQ03431 593 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 CUL4AQ13619 759 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 PARP10Q53GL7 1025 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 PRPF40BQ6NWY9 871 aaKnown RBP13.02□□□□□ -0.32
H3F3A-202ENST00000366814 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 MAP4K1Q92918 833 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 PAG1Q9NWQ8 432 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 HMG20BQ9P0W2 317 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.32
H3F3A-202ENST00000366814 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 SBF1O95248 1867 aa13.02□□□□□ -0.32
H3F3A-202ENST00000366814 MED23Q9ULK4 1368 aa13.02□□□□□ -0.33
H3F3A-202ENST00000366814 CCDC88AQ3V6T2 1871 aa13.02□□□□□ -0.33
H3F3A-202ENST00000366814 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
H3F3A-202ENST00000366814 IFIT1P09914 478 aaKnown RBP13.02□□□□□ -0.33
H3F3A-202ENST00000366814 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.33
H3F3A-202ENST00000366814 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
H3F3A-202ENST00000366814 KCNB2Q92953 911 aa13.02□□□□□ -0.33
H3F3A-202ENST00000366814 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
H3F3A-202ENST00000366814 CYP46A1Q9Y6A2 500 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms