RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 BMP15O95972 392 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 IARSP41252 1262 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 TMEM87AQ8NBN3 555 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 MAP4K1Q92918 833 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 VGLL3A8MV65 326 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 MARCH6O60337 910 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 ANO6Q4KMQ2 910 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 IQCEQ6IPM2 695 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 ARHGEF25Q86VW2 580 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 FAM177A1Q8N128 213 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 PIBF1Q8WXW3 757 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 MRPS27Q92552 414 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 KRT23Q9C075 422 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 ORC3Q9UBD5 711 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 GBP2P32456 591 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 LMAN1P49257 510 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 CLGNO14967 610 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 IDH1O75874 414 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 TFCP2Q12800 502 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 ENOX2Q16206 610 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 DDX46Q7L014 1031 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 COPRSQ9NQ92 184 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 CYP2E1P05181 493 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 IVLP07476 585 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 GNAT2P19087 354 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PPFIBP1Q86W92 1011 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ELP1O95163 1332 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ATP5J2-PTCD1G3V325 749 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 EYA2O00167 538 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PTCD1O75127 700 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCDC181Q5TID7 509 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CLSTN2Q9H4D0 955 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CD163L1Q9NR16 1453 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 KCNA4P22459 653 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 USP42Q9H9J4 1324 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 NEURL1BA8MQ27 555 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 SARNPP82979 210 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PAIP2Q9BPZ3 127 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 LARP6Q9BRS8 491 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 SLC12A7Q9Y666 1083 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 RFX7Q2KHR2 1363 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 GOLGA8AA7E2F4 631 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 GOLGA8BA8MQT2 603 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 SLC39A6Q13433 755 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 KIAA1328Q86T90 577 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CKAP2LQ8IYA6 745 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZNF274Q96GC6 653 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 RBM28Q9NW13 759 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 IFT172Q9UG01 1749 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 DDIT3P35638 169 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 STIM1Q13586 685 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ATP2B3Q16720 1220 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 GAS2L3Q86XJ1 694 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 GPT2Q8TD30 523 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZFP91Q96JP5 570 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 KIF2CQ99661 725 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 TRMT112Q9UI30 125 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ERVV-2B6SEH9 535 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CD2BP2O95400 341 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PHKG2P15735 406 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCT2P78371 535 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CNNM3Q8NE01 707 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PI4K2BQ8TCG2 481 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ALDH8A1Q9H2A2 487 aaPredicted RBP6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZNF287Q9HBT7 754 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 ATG3Q9NT62 314 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CASQ1P31415 396 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 CRACR2AQ9BSW2 395 aa6.17□□□□□ -1.42
CDC42BPA-204ENST00000366767 PTPDC1A2A3K4 754 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 TMEM87BQ96K49 555 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZBTB3Q9H5J0 574 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 LRP2BPQ9P2M1 347 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 MAGEC2Q9UBF1 373 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 MTMR6Q9Y217 621 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 ATP10DQ9P241 1426 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 KLF18A0A0U1RQI7 1052 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 IFIT3O14879 490 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 CAVIN4Q5BKX8 364 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCDC102BQ68D86 513 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 IQCA1Q86XH1 822 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 RASSF4Q9H2L5 321 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 IMPACTQ9P2X3 320 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 IL2RBP14784 551 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 APPBP2Q92624 585 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.16□□□□□ -1.422e-7■■□□□ 12.9
CDC42BPA-204ENST00000366767 CLTCQ00610 1675 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 PALD1Q9ULE6 856 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 G3V3G9 751 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 EXOC5O00471 708 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 PRC1O43663 620 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 CFAP100Q494V2 611 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 MAP9Q49MG5 647 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 DCAF8Q5TAQ9 597 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 CPSF2Q9P2I0 782 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 MCM3P25205 808 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 TUBB4BP68371 445 aa6.16□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCDC178Q5BJE1 867 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms