RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 DNAJC14Q6Y2X3 702 aaPredicted RBP11.48□□□□□ -0.57
YBX3-204ENST00000366290 KLRG1Q96E93 195 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 BCS1LQ9Y276 419 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 EID1Q9Y6B2 187 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
YBX3-204ENST00000366290 MAPK1P28482 360 aa11.47□□□□□ -0.57
YBX3-204ENST00000366290 ITGA6P23229 1130 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 AAMPQ13685 434 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 ARSJQ5FYB0 599 aaPredicted RBP11.46□□□□□ -0.57
YBX3-204ENST00000366290 NANOS1Q8WY41 292 aaKnown RBP11.46□□□□□ -0.57
YBX3-204ENST00000366290 HSH2DQ96JZ2 352 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 SUSD3Q96L08 255 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 ZIC5Q96T25 663 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 GPAMQ9HCL2 828 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 DYRK1BQ9Y463 629 aa11.46□□□□□ -0.57
YBX3-204ENST00000366290 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.58
YBX3-204ENST00000366290 TGFBR3LH3BV60 316 aa11.45□□□□□ -0.58
YBX3-204ENST00000366290 ATCAYQ86WG3 371 aa11.45□□□□□ -0.58
YBX3-204ENST00000366290 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
YBX3-204ENST00000366290 ZNF280CQ8ND82 737 aa11.45□□□□□ -0.58
YBX3-204ENST00000366290 FOXD4L4Q8WXT5 416 aaPredicted RBP11.45□□□□□ -0.58
YBX3-204ENST00000366290 TRPM2O94759 1503 aa11.45□□□□□ -0.58
YBX3-204ENST00000366290 NDUFB5O43674 189 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 FZD6O60353 706 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 ZAP70P43403 619 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 TREML1Q86YW5 311 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
YBX3-204ENST00000366290 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
YBX3-204ENST00000366290 IER5Q5VY09 327 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 GAS2L1Q99501 681 aaPredicted RBP11.43□□□□□ -0.58
YBX3-204ENST00000366290 CRISPLD1Q9H336 500 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 NEUROD4Q9HD90 331 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
YBX3-204ENST00000366290 PLEKHG1Q9ULL1 1385 aa11.42□□□□□ -0.58
YBX3-204ENST00000366290 A0A1W2PNR3 127 aa11.42□□□□□ -0.58
YBX3-204ENST00000366290 F11P03951 625 aa11.42□□□□□ -0.58
YBX3-204ENST00000366290 ERCC3P19447 782 aa11.42□□□□□ -0.58
YBX3-204ENST00000366290 LRRC69Q6ZNQ3 347 aa11.42□□□□□ -0.58
YBX3-204ENST00000366290 DMGDHQ9UI17 866 aaKnown RBP11.42□□□□□ -0.58
YBX3-204ENST00000366290 MICAL2O94851 1124 aa11.41□□□□□ -0.58
YBX3-204ENST00000366290 KRT76Q01546 638 aa11.41□□□□□ -0.58
YBX3-204ENST00000366290 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
YBX3-204ENST00000366290 ASB16Q96NS5 453 aa11.41□□□□□ -0.58
YBX3-204ENST00000366290 RBCK1Q9BYM8 510 aa11.41□□□□□ -0.58
YBX3-204ENST00000366290 CLTCL1P53675 1640 aa11.41□□□□□ -0.58
YBX3-204ENST00000366290 ANKRD33BA6NCL7 494 aa11.4□□□□□ -0.58
YBX3-204ENST00000366290 ZSCAN29Q8IWY8 852 aaPredicted RBP11.4□□□□□ -0.58
YBX3-204ENST00000366290 PGBD3Q8N328 593 aa11.4□□□□□ -0.58
YBX3-204ENST00000366290 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.58
YBX3-204ENST00000366290 NWD1Q149M9 1564 aa11.4□□□□□ -0.58
YBX3-204ENST00000366290 KIF1BO60333 1816 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 IDH3AP50213 366 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 DNM1Q05193 864 aaKnown RBP11.39□□□□□ -0.59
YBX3-204ENST00000366290 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 EDEM1Q92611 657 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 STK17AQ9UEE5 414 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
YBX3-204ENST00000366290 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
YBX3-204ENST00000366290 MZF1P28698 734 aaPredicted RBP11.38□□□□□ -0.59
YBX3-204ENST00000366290 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
YBX3-204ENST00000366290 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
YBX3-204ENST00000366290 CITED4Q96RK1 184 aa11.38□□□□□ -0.59
YBX3-204ENST00000366290 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
YBX3-204ENST00000366290 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
YBX3-204ENST00000366290 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 PDGFAP04085 211 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 KCNA6P17658 529 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 TMC7Q7Z402 723 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 NPAS4Q8IUM7 802 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 VWA5B2Q8N398 1253 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 FAM13BQ9NYF5 915 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 SETBP1Q9Y6X0 1596 aa11.37□□□□□ -0.59
YBX3-204ENST00000366290 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 NRXN3Q9Y4C0 1643 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 CDC14CA4D256 554 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 OPLAHO14841 1288 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 RIPOR1Q6ZS17 1223 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 NLRP8Q86W28 1048 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 TMC1Q8TDI8 760 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 RAB3GAP2Q9H2M9 1393 aa11.36□□□□□ -0.59
YBX3-204ENST00000366290 FAM135BQ49AJ0 1406 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 INPP5BP32019 993 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 USP5P45974 858 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 ARSDP51689 593 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 TYRO3Q06418 890 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 EFHC2Q5JST6 749 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
YBX3-204ENST00000366290 MPHOSPH9Q99550 1183 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms