RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 KIF4BQ2VIQ3 1234 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 HHIPL1Q96JK4 782 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 SRCIN1Q9C0H9 1055 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 COA1Q9GZY4 146 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
TNFRSF1A-202ENST00000366159 POLR2AP24928 1970 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 KLRK1P26718 216 aa17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 DACT2Q5SW24 774 aa17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 DLK2Q6UY11 383 aa17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 C15orf52Q6ZUT6 534 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 USP48Q86UV5 1035 aa17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 SSH1Q8WYL5 1049 aa17.34■□□□□ 0.37
TNFRSF1A-202ENST00000366159 FOXN1O15353 648 aa17.33■□□□□ 0.36
TNFRSF1A-202ENST00000366159 RBM26Q5T8P6 1007 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-202ENST00000366159 SLC4A10Q6U841 1118 aa17.33■□□□□ 0.36
TNFRSF1A-202ENST00000366159 PTPRCP08575 1304 aa17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 NBPF7P0C2Y1 421 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 USP17L8P0C7I0 530 aa17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 STRIP1Q5VSL9 837 aa17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ASTN2O75129 1339 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-202ENST00000366159 SNAP23O00161 211 aa17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 DCPSQ96C86 337 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 SUCLG2Q96I99 432 aa17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 TAF5LO75529 589 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ECE1P42892 770 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 SCARF1Q14162 830 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 RABL6Q3YEC7 729 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 LDHAL6AQ6ZMR3 332 aa17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 HELBQ8NG08 1087 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ZNF408Q9H9D4 720 aa17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CD209Q9NNX6 404 aa17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 GGA3Q9NZ52 723 aa17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MAP2K2P36507 400 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 MMP14P50281 582 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 TTLL5Q6EMB2 1281 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
TNFRSF1A-202ENST00000366159 CT47B1P0C2W7 299 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-202ENST00000366159 IL1R1P14778 569 aa17.27■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ANGEL2Q5VTE6 544 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1A-202ENST00000366159 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
TNFRSF1A-202ENST00000366159 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
TNFRSF1A-202ENST00000366159 AOC2O75106 756 aa17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 KCNJ4P48050 445 aa17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 CTCFP49711 727 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 PUS3Q9BZE2 481 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 BICC1Q9H694 974 aaKnown RBP17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 RIPOR2Q9Y4F9 1068 aa17.26■□□□□ 0.35
TNFRSF1A-202ENST00000366159 WNT10BO00744 389 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 GTF2IP78347 998 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 CDCA5Q96FF9 252 aa17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF1A-202ENST00000366159 HSPA8P11142 646 aaKnown RBP17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 HUNKP57058 714 aa17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
TNFRSF1A-202ENST00000366159 FAM155AB1AL88 458 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 FKBP1AP62942 108 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 C2orf69Q8N8R5 385 aa17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
TNFRSF1A-202ENST00000366159 LBX1P52954 281 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 GRM1Q13255 1194 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 RGMBQ6NW40 437 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
TNFRSF1A-202ENST00000366159 PLIN1O60240 522 aa17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 VGLL2Q8N8G2 317 aa17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 MTMR14Q8NCE2 650 aa17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 TDRD7Q8NHU6 1098 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 ZIC5Q96T25 663 aa17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-202ENST00000366159 MROH5Q6ZUA9 1318 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms