RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 PALM3A6NDB9 673 aaPredicted RBP3.9□□□□□ -1.79
MIR539-201ENST00000365690 SART1O43290 800 aaKnown RBP3.9□□□□□ -1.79
MIR539-201ENST00000365690 CFPP27918 469 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 ATP1A2P50993 1020 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 ZNF792Q3KQV3 632 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 USP17L2Q6R6M4 530 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 USP17L1Q7RTZ2 530 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 SPRED2Q7Z698 418 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 ZNF594Q96JF6 807 aaPredicted RBP3.9□□□□□ -1.79
MIR539-201ENST00000365690 ZMYND15Q9H091 742 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 PRM3Q9NNZ6 103 aa3.9□□□□□ -1.79
MIR539-201ENST00000365690 ZC3H7BQ9UGR2 993 aaKnown RBP3.9□□□□□ -1.79
MIR539-201ENST00000365690 FAM170BA6NMN3 283 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 CYP26A1O43174 497 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 TRIP4Q15650 581 aaPredicted RBP3.89□□□□□ -1.79
MIR539-201ENST00000365690 CEP135Q66GS9 1140 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 HGSNATQ68CP4 663 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 GLIS3Q8NEA6 775 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 ADAMTS19Q8TE59 1207 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 BCL7CQ8WUZ0 217 aaPredicted RBP3.89□□□□□ -1.79
MIR539-201ENST00000365690 UCN2Q96RP3 112 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 RNF208Q9H0X6 261 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 RASSF4Q9H2L5 321 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 LRFN2Q9ULH4 789 aa3.89□□□□□ -1.79
MIR539-201ENST00000365690 MEGF11A6BM72 1044 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 TIAF1O95411 115 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 CDPF1Q6NVV7 123 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 TTLL10Q6ZVT0 673 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 RGL4Q8IZJ4 473 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 CMTR1Q8N1G2 835 aaKnown RBP3.88□□□□□ -1.79
MIR539-201ENST00000365690 FAM168AQ92567 244 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 RUSC1Q9BVN2 902 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 RBSNQ9H1K0 784 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 SEC31BQ9NQW1 1179 aa3.88□□□□□ -1.79
MIR539-201ENST00000365690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.88□□□□□ -1.79
MIR539-201ENST00000365690 MKRN1Q9UHC7 482 aaKnown RBP3.88□□□□□ -1.79
MIR539-201ENST00000365690 IGFBP4P22692 258 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 PKN1Q16512 942 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 C11orf91Q3C1V1 193 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 ZAR1Q86SH2 424 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 KSR1Q8IVT5 923 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 OR13H1Q8NG92 308 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 GIMAP7Q8NHV1 300 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 MYO19Q96H55 970 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 POP1Q99575 1024 aaKnown RBP3.87□□□□□ -1.79
MIR539-201ENST00000365690 ADAM19Q9H013 955 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 PRKAG2Q9UGJ0 569 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 ADAMTS6Q9UKP5 1117 aa3.87□□□□□ -1.79
MIR539-201ENST00000365690 FAM95CA0A1B0GW59 222 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 GAS2O43903 313 aaKnown RBP3.86□□□□□ -1.79
MIR539-201ENST00000365690 DLGAP3O95886 979 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 NLRP12P59046 1061 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 NFKBIBQ15653 356 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 FAM26DQ5JW98 314 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 FDX2Q6P4F2 183 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 ATG4DQ86TL0 474 aaPredicted RBP3.86□□□□□ -1.79
MIR539-201ENST00000365690 TREML1Q86YW5 311 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 FBLIM1Q8WUP2 373 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 TMEM40Q8WWA1 233 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 METTL22Q9BUU2 404 aaPredicted RBP3.86□□□□□ -1.79
MIR539-201ENST00000365690 TMPRSS13Q9BYE2 586 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 LMCD1Q9NZU5 365 aa3.86□□□□□ -1.79
MIR539-201ENST00000365690 BIN1O00499 593 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 KIF4AO95239 1232 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 RNASE1P07998 156 aaKnown RBP3.85□□□□□ -1.79
MIR539-201ENST00000365690 RXRBP28702 533 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 PLCL1Q15111 1095 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 NEUROD2Q15784 382 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 NLRP13Q86W25 1043 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 PBX4Q9BYU1 374 aa3.85□□□□□ -1.79
MIR539-201ENST00000365690 MBNL3Q9NUK0 354 aaKnown RBP3.85□□□□□ -1.79
MIR539-201ENST00000365690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.85□□□□□ -1.79
MIR539-201ENST00000365690 H3BRJ5 948 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 SMNDC1O75940 238 aaKnown RBP eCLIP3.84□□□□□ -1.79
MIR539-201ENST00000365690 CYP2E1P05181 493 aaPredicted RBP3.84□□□□□ -1.79
MIR539-201ENST00000365690 DRD2P14416 443 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 SEC13P55735 322 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 PIP4K2BP78356 416 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 BNIP3Q12983 259 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 ECM1Q16610 540 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 FAM117BQ6P1L5 589 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 CEP120Q8N960 986 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 SMG8Q8ND04 991 aaKnown RBP3.84□□□□□ -1.79
MIR539-201ENST00000365690 BHLHE22Q8NFJ8 381 aaPredicted RBP3.84□□□□□ -1.79
MIR539-201ENST00000365690 EZH1Q92800 747 aaPredicted RBP3.84□□□□□ -1.79
MIR539-201ENST00000365690 FAM84AQ96KN4 292 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 TBC1D32Q96NH3 1257 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 SUGCTQ9HAC7 445 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 OSGEPQ9NPF4 335 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 COG6Q9Y2V7 657 aa3.84□□□□□ -1.79
MIR539-201ENST00000365690 ATP9BO43861 1147 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 KRT1P04264 644 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 HYAL2Q12891 473 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 PAOXQ6QHF9 649 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 ZNF765Q7L2R6 523 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 SIAH1Q8IUQ4 282 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 C12orf50Q8NA57 414 aaPredicted RBP3.83□□□□□ -1.8
MIR539-201ENST00000365690 C2CD4AQ8NCU7 369 aaPredicted RBP3.83□□□□□ -1.8
MIR539-201ENST00000365690 WNT8BQ93098 351 aa3.83□□□□□ -1.8
MIR539-201ENST00000365690 LRRC4CQ9HCJ2 640 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms