RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 FCGRTP55899 365 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 POU4F2Q12837 409 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 LBRQ14739 615 aaKnown RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 ARSJQ5FYB0 599 aaPredicted RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 ZNF697Q5TEC3 545 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 TRIM42Q8IWZ5 723 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 REXO1Q8N1G1 1221 aaKnown RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 RNF217Q8TC41 542 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 NKD1Q969G9 470 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 NECAB3Q96P71 396 aaPredicted RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 TYW1Q9NV66 732 aaKnown RBP5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 TMEM260Q9NX78 707 aa5.54□□□□□ -1.52
RNVU1-3-201ENST00000364313 GDF9O60383 454 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 CTSOP43234 321 aaPredicted RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 PHKA2P46019 1235 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 APOBRQ0VD83 1088 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 LAMC2Q13753 1193 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 SCARA3Q6AZY7 606 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 DTHD1Q6ZMT9 781 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 NOL8Q76FK4 1167 aaKnown RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 LYSMD3Q7Z3D4 306 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 FILIP1Q7Z7B0 1213 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 RPUSD2Q8IZ73 545 aaKnown RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 LINC00528Q8N1L1 170 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 GOLM1Q8NBJ4 401 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 HNRNPLLQ8WVV9 542 aaKnown RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 APPBP2Q92624 585 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 ZNF669Q96BR6 464 aaPredicted RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 GSX2Q9BZM3 304 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 BHLHE41Q9C0J9 482 aaPredicted RBP5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 LIN7BQ9HAP6 207 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 BRD7Q9NPI1 651 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 TIMMDC1Q9NPL8 285 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 LATS2Q9NRM7 1088 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 DZANK1Q9NVP4 752 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
RNVU1-3-201ENST00000364313 PHF20L1A8MW92 1017 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 J3QL48 77 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 ENC1O14682 589 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 EFSO43281 561 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CDC45O75419 566 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 FAM157BP0CG42 384 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 IMPDH2P12268 514 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 SMPD1P17405 629 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 TFE3P19532 575 aaPredicted RBP5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CRKP46108 304 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CASP7P55210 303 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CCINQ13939 588 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 HOMER1Q86YM7 354 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 SYNPOQ8N3V7 929 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 LILRB2Q8N423 598 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CEP120Q8N960 986 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 SH3TC2Q8TF17 1288 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CPLX3Q8WVH0 158 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CNTNAP3BQ96NU0 1288 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 CNTNAP3Q9BZ76 1288 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 SLKQ9H2G2 1235 aaPredicted RBP5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 UBP1Q9NZI7 540 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 KCNH4Q9UQ05 1017 aa5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 R3HCC1Q9Y3T6 440 aaKnown RBP5.52□□□□□ -1.53
RNVU1-3-201ENST00000364313 FAM221AA4D161 298 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 SMAD7O15105 426 aaKnown RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 MMP20O60882 483 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 CYP2E1P05181 493 aaPredicted RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 VIL1P09327 827 aaKnown RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 MPP2Q14168 576 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 DDR2Q16832 855 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 SNAP47Q5SQN1 464 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 TTBK2Q6IQ55 1244 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 GATAD2BQ8WXI9 593 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 ZCCHC2Q9C0B9 1178 aaKnown RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 POLMQ9NP87 494 aaPredicted RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 TLR7Q9NYK1 1049 aaKnown RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 TLR6Q9Y2C9 796 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 AKAP2Q9Y2D5 859 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 DYRK1BQ9Y463 629 aa5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.51□□□□□ -1.53
RNVU1-3-201ENST00000364313 NFKBIEO00221 500 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 PDPK1O15530 556 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 UPP2O95045 317 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 F11P03951 625 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 CELA3AP09093 270 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 ZNF165P49910 485 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 AMPD3Q01432 767 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 TAF7LQ5H9L4 462 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 C19orf47Q8N9M1 422 aaKnown RBP5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 ANAPC16Q96DE5 110 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 DNAJC7Q99615 494 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 OSMRQ99650 979 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 FEZ1Q99689 392 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 ZKSCAN3Q9BRR0 538 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 IRF2BPLQ9H1B7 796 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 SEC31BQ9NQW1 1179 aa5.5□□□□□ -1.53
RNVU1-3-201ENST00000364313 FANCLQ9NW38 375 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms