RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 FZD9O00144 591 aa17.04■□□□□ 0.32
NSMCE1-201ENST00000361439 LRRCC1Q9C099 1032 aa17.04■□□□□ 0.32
NSMCE1-201ENST00000361439 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
NSMCE1-201ENST00000361439 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
NSMCE1-201ENST00000361439 G3V3G9 751 aa17.03■□□□□ 0.32
NSMCE1-201ENST00000361439 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
NSMCE1-201ENST00000361439 ZNRF3Q9ULT6 936 aa17.03■□□□□ 0.32
NSMCE1-201ENST00000361439 SBF1O95248 1867 aa17.03■□□□□ 0.32
NSMCE1-201ENST00000361439 WTIPA6NIX2 430 aaPredicted RBP17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 IL1R1P14778 569 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 VPS37DQ86XT2 251 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 FAM84BQ96KN1 310 aaPredicted RBP17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
NSMCE1-201ENST00000361439 ZNF609O15014 1411 aa17.02■□□□□ 0.31
NSMCE1-201ENST00000361439 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.31
NSMCE1-201ENST00000361439 SNAP23O00161 211 aa17.01■□□□□ 0.31
NSMCE1-201ENST00000361439 ECE2O60344 883 aa17.01■□□□□ 0.31
NSMCE1-201ENST00000361439 TXNRD3Q86VQ6 643 aa17.01■□□□□ 0.31
NSMCE1-201ENST00000361439 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
NSMCE1-201ENST00000361439 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
NSMCE1-201ENST00000361439 KLRK1P26718 216 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
NSMCE1-201ENST00000361439 TIMM10P62072 90 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 XAGE2Q96GT9 111 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
NSMCE1-201ENST00000361439 CD209Q9NNX6 404 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 CHD4Q14839 1912 aa17■□□□□ 0.31
NSMCE1-201ENST00000361439 SEMA3EO15041 775 aa16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 IGHDP01880 384 aa16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 TNIP1Q15025 636 aa16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 ZBTB47Q9UFB7 747 aaPredicted RBP16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
NSMCE1-201ENST00000361439 GYG1P46976 350 aa16.98■□□□□ 0.31
NSMCE1-201ENST00000361439 DOK7Q18PE1 504 aa16.98■□□□□ 0.31
NSMCE1-201ENST00000361439 ZNF512BQ96KM6 892 aaPredicted RBP16.98■□□□□ 0.31
NSMCE1-201ENST00000361439 COL4A5P29400 1685 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 YDJCA8MPS7 323 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 MMP14P50281 582 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 BCAMP50895 628 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 CCDC158Q5M9N0 1113 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 CIAPIN1Q6FI81 312 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 AACSQ86V21 672 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 GPC2Q8N158 579 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 CCDC88AQ3V6T2 1871 aa16.97■□□□□ 0.31
NSMCE1-201ENST00000361439 ARAP2Q8WZ64 1704 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 USP17L3A6NCW0 530 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 USP17L4A6NCW7 530 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 GLTPD2A6NH11 291 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 APBB1O00213 710 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 UQCRFS1P1P0C7P4 283 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 FKBP1AP62942 108 aaKnown RBP16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 CXCL9Q07325 125 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 USP17L1Q7RTZ2 530 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
NSMCE1-201ENST00000361439 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.3
NSMCE1-201ENST00000361439 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.3
NSMCE1-201ENST00000361439 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 RPS12P25398 132 aaKnown RBP16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 ARID4AP29374 1257 aaPredicted RBP16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 ADORA1P30542 326 aa16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
NSMCE1-201ENST00000361439 TIAM2Q8IVF5 1701 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 IGSF3O75054 1194 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 FRAT2O75474 233 aaPredicted RBP16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 NUCB1Q02818 461 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 TBC1D22AQ8WUA7 517 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 DPF2Q92785 391 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
NSMCE1-201ENST00000361439 PSMD14O00487 310 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 RAD17O75943 681 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 PHKA1P46020 1223 aa16.93■□□□□ 0.3
NSMCE1-201ENST00000361439 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms