RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 BSDC1Q9NW68 430 aaPredicted RBP27.15■■□□□ 1.94
CD47-202ENST00000361309 MED23Q9ULK4 1368 aa27.14■■□□□ 1.94
CD47-202ENST00000361309 FKBP1BP68106 108 aa27.14■■□□□ 1.94
CD47-202ENST00000361309 TSR2Q969E8 191 aaKnown RBP27.14■■□□□ 1.94
CD47-202ENST00000361309 NEXNQ0ZGT2 675 aa27.13■■□□□ 1.93
CD47-202ENST00000361309 CWF19L2Q2TBE0 894 aaKnown RBP27.13■■□□□ 1.93
CD47-202ENST00000361309 MXD3Q9BW11 206 aa27.13■■□□□ 1.93
CD47-202ENST00000361309 CCT4P50991 539 aaKnown RBP27.12■■□□□ 1.93
CD47-202ENST00000361309 NBPF9Q3BBW0 867 aa27.12■■□□□ 1.93
CD47-202ENST00000361309 MOB2Q70IA6 237 aa27.12■■□□□ 1.93
CD47-202ENST00000361309 STK31Q9BXU1 1019 aa27.12■■□□□ 1.93
CD47-202ENST00000361309 PDE4DIPQ5VU43 2346 aa27.11■■□□□ 1.93
CD47-202ENST00000361309 NEURL1BA8MQ27 555 aa27.11■■□□□ 1.93
CD47-202ENST00000361309 DACT2Q5SW24 774 aa27.11■■□□□ 1.93
CD47-202ENST00000361309 REM2Q8IYK8 340 aaPredicted RBP27.11■■□□□ 1.93
CD47-202ENST00000361309 FBXW7Q969H0 707 aa27.11■■□□□ 1.93
CD47-202ENST00000361309 CACNA1FO60840 1977 aa27.1■■□□□ 1.93
CD47-202ENST00000361309 SLC34A2O95436 690 aa27.1■■□□□ 1.93
CD47-202ENST00000361309 PRAMEF18Q5VWM3 479 aa27.1■■□□□ 1.93
CD47-202ENST00000361309 G2E3Q7L622 706 aa27.1■■□□□ 1.93
CD47-202ENST00000361309 UBE3BQ7Z3V4 1068 aa27.09■■□□□ 1.93
CD47-202ENST00000361309 UBE2Q2LH0YL09 131 aa27.08■■□□□ 1.93
CD47-202ENST00000361309 H7C1W4 665 aa27.08■■□□□ 1.93
CD47-202ENST00000361309 TXNRD3Q86VQ6 643 aa27.08■■□□□ 1.93
CD47-202ENST00000361309 OGFOD1Q8N543 542 aa27.08■■□□□ 1.93
CD47-202ENST00000361309 COA1Q9GZY4 146 aa27.08■■□□□ 1.93
CD47-202ENST00000361309 IGHMBP2P38935 993 aaKnown RBP27.07■■□□□ 1.92
CD47-202ENST00000361309 STRIP1Q5VSL9 837 aa27.07■■□□□ 1.92
CD47-202ENST00000361309 LEMD3Q9Y2U8 911 aa27.07■■□□□ 1.92
CD47-202ENST00000361309 WNT10BO00744 389 aa27.06■■□□□ 1.92
CD47-202ENST00000361309 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
CD47-202ENST00000361309 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
CD47-202ENST00000361309 CTU1Q7Z7A3 348 aaKnown RBP27.06■■□□□ 1.92
CD47-202ENST00000361309 MYO3BQ8WXR4 1341 aa27.06■■□□□ 1.92
CD47-202ENST00000361309 TTLL12Q14166 644 aaPredicted RBP27.05■■□□□ 1.92
CD47-202ENST00000361309 ITGA6P23229 1130 aa27.04■■□□□ 1.92
CD47-202ENST00000361309 SOX10P56693 466 aa27.04■■□□□ 1.92
CD47-202ENST00000361309 ZNF804BA4D1E1 1349 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 SASH1O94885 1247 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 KLRK1P26718 216 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 GCKRQ14397 625 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 CCDC27Q2M243 656 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 CCDC184Q52MB2 194 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 TTLL5Q6EMB2 1281 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 WWC1Q8IX03 1113 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 PLA2G12BQ9BX93 195 aa27.03■■□□□ 1.92
CD47-202ENST00000361309 MPHOSPH8Q99549 860 aa27.02■■□□□ 1.92
CD47-202ENST00000361309 ANKRD2Q9GZV1 360 aa27.02■■□□□ 1.92
CD47-202ENST00000361309 NF2P35240 595 aa27.01■■□□□ 1.91
CD47-202ENST00000361309 A0A1B0GUL6 1792 aa27.01■■□□□ 1.91
CD47-202ENST00000361309 TBC1D8O95759 1140 aa27■■□□□ 1.91
CD47-202ENST00000361309 MMP14P50281 582 aa27■■□□□ 1.91
CD47-202ENST00000361309 CASP7P55210 303 aa27■■□□□ 1.91
CD47-202ENST00000361309 FLIIQ13045 1269 aa27■■□□□ 1.91
CD47-202ENST00000361309 KIAA0825Q8IV33 1275 aa27■■□□□ 1.91
CD47-202ENST00000361309 ECM29Q5VYK3 1845 aa27■■□□□ 1.91
CD47-202ENST00000361309 CSF1RP07333 972 aa26.99■■□□□ 1.91
CD47-202ENST00000361309 GTF2IP78347 998 aa26.99■■□□□ 1.91
CD47-202ENST00000361309 HDAC9Q9UKV0 1011 aa26.99■■□□□ 1.91
CD47-202ENST00000361309 KCNJ4P48050 445 aa26.98■■□□□ 1.91
CD47-202ENST00000361309 TM4SF4P48230 202 aa26.98■■□□□ 1.91
CD47-202ENST00000361309 MKRN3Q13064 507 aaKnown RBP26.98■■□□□ 1.91
CD47-202ENST00000361309 FKBP5Q13451 457 aaPredicted RBP26.98■■□□□ 1.91
CD47-202ENST00000361309 DNAAF4Q8WXU2 420 aa26.98■■□□□ 1.91
CD47-202ENST00000361309 MYH16Q9H6N6 1097 aa26.98■■□□□ 1.91
CD47-202ENST00000361309 CHRNDQ07001 517 aa26.97■■□□□ 1.91
CD47-202ENST00000361309 PRKG1Q13976 671 aa26.97■■□□□ 1.91
CD47-202ENST00000361309 APOBEC3FQ8IUX4 373 aaKnown RBP26.97■■□□□ 1.91
CD47-202ENST00000361309 ZNF296Q8WUU4 475 aaPredicted RBP26.97■■□□□ 1.91
CD47-202ENST00000361309 IL16Q14005 1332 aa26.96■■□□□ 1.91
CD47-202ENST00000361309 PTPN12Q05209 780 aaKnown RBP26.96■■□□□ 1.91
CD47-202ENST00000361309 LINS1Q8NG48 757 aa26.96■■□□□ 1.91
CD47-202ENST00000361309 ARMC9Q7Z3E5 817 aa26.95■■□□□ 1.9
CD47-202ENST00000361309 ZBED3Q96IU2 234 aaPredicted RBP26.95■■□□□ 1.9
CD47-202ENST00000361309 CD209Q9NNX6 404 aa26.95■■□□□ 1.9
CD47-202ENST00000361309 HPS5Q9UPZ3 1129 aa26.95■■□□□ 1.9
CD47-202ENST00000361309 ANKRD18BA2A2Z9 1011 aa26.94■■□□□ 1.9
CD47-202ENST00000361309 SNAP23O00161 211 aa26.94■■□□□ 1.9
CD47-202ENST00000361309 PKN2Q16513 984 aaKnown RBP26.94■■□□□ 1.9
CD47-202ENST00000361309 FANCIQ9NVI1 1328 aa26.92■■□□□ 1.9
CD47-202ENST00000361309 GPR25O00155 361 aa26.92■■□□□ 1.9
CD47-202ENST00000361309 TAF5LO75529 589 aa26.92■■□□□ 1.9
CD47-202ENST00000361309 SREBF2Q12772 1141 aa26.92■■□□□ 1.9
CD47-202ENST00000361309 HELBQ8NG08 1087 aaPredicted RBP26.92■■□□□ 1.9
CD47-202ENST00000361309 ANGEL1Q9UNK9 670 aaKnown RBP26.92■■□□□ 1.9
CD47-202ENST00000361309 IRS2Q9Y4H2 1338 aa26.91■■□□□ 1.9
CD47-202ENST00000361309 LDLRAD1Q5T700 205 aa26.91■■□□□ 1.9
CD47-202ENST00000361309 CERS5Q8N5B7 392 aa26.91■■□□□ 1.9
CD47-202ENST00000361309 FZD1Q9UP38 647 aa26.91■■□□□ 1.9
CD47-202ENST00000361309 COL1A1P02452 1464 aaPredicted RBP26.9■■□□□ 1.9
CD47-202ENST00000361309 VAMP4O75379 141 aa26.9■■□□□ 1.9
CD47-202ENST00000361309 FOXO4P98177 505 aa26.9■■□□□ 1.9
CD47-202ENST00000361309 DLGAP5Q15398 846 aa26.9■■□□□ 1.9
CD47-202ENST00000361309 DEFB129Q9H1M3 183 aa26.9■■□□□ 1.9
CD47-202ENST00000361309 IFIT5Q13325 482 aaKnown RBP26.89■■□□□ 1.9
CD47-202ENST00000361309 NOM1Q5C9Z4 860 aaKnown RBP26.89■■□□□ 1.9
CD47-202ENST00000361309 SPRYD7Q5W111 196 aa26.89■■□□□ 1.9
CD47-202ENST00000361309 C15orf52Q6ZUT6 534 aaKnown RBP26.89■■□□□ 1.9
CD47-202ENST00000361309 CHMP3Q9Y3E7 222 aa26.89■■□□□ 1.9
CD47-202ENST00000361309 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms