RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 MVPQ14764 893 aaKnown RBP9.4□□□□□ -0.9
CCL28-201ENST00000361115 SMIM5Q71RC9 77 aa9.4□□□□□ -0.9
CCL28-201ENST00000361115 AGBL3Q8NEM8 1001 aa9.4□□□□□ -0.9
CCL28-201ENST00000361115 KIF2CQ99661 725 aa9.4□□□□□ -0.9
CCL28-201ENST00000361115 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
CCL28-201ENST00000361115 DLG5Q8TDM6 1919 aa9.4□□□□□ -0.9
CCL28-201ENST00000361115 SREBF2Q12772 1141 aa9.4□□□□□ -0.91
CCL28-201ENST00000361115 PPP2R3BQ9Y5P8 575 aa9.4□□□□□ -0.91
CCL28-201ENST00000361115 DDX49Q9Y6V7 483 aaKnown RBP9.4□□□□□ -0.91
CCL28-201ENST00000361115 CNPY4Q8N129 248 aa9.39□□□□□ -0.91
CCL28-201ENST00000361115 RBSNQ9H1K0 784 aa9.39□□□□□ -0.91
CCL28-201ENST00000361115 NTSR2O95665 410 aa9.39□□□□□ -0.91
CCL28-201ENST00000361115 DGKZQ13574 1117 aa9.39□□□□□ -0.91
CCL28-201ENST00000361115 KLHL40Q2TBA0 621 aa9.39□□□□□ -0.91
CCL28-201ENST00000361115 PTMSP20962 102 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 GTF2E1P29083 439 aaPredicted RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 GRAPQ13588 217 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 NGEFQ8N5V2 710 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 GRAPLQ8TC17 118 aaPredicted RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 DYNC1I1O14576 645 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 SLC39A6Q13433 755 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 TEX2Q8IWB9 1127 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 UTP14AQ9BVJ6 771 aaKnown RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 COL4A5P29400 1685 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 CCDC85CA6NKD9 419 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 HS1BP3Q53T59 392 aa9.38□□□□□ -0.91
CCL28-201ENST00000361115 ZCCHC17Q9NP64 241 aaKnown RBP9.38□□□□□ -0.91
CCL28-201ENST00000361115 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 PPIP5K2O43314 1243 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 CST9Q5W186 159 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 FBXO46Q6PJ61 603 aaPredicted RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 JARID2Q92833 1246 aaPredicted RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 GBA2Q9HCG7 927 aaPredicted RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 PRMT2P55345 433 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 ZNF445P59923 1031 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 DMTNQ08495 405 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 TRIM28Q13263 835 aaKnown RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 SF3B3Q15393 1217 aaKnown RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 CAVIN1Q6NZI2 390 aaKnown RBP9.37□□□□□ -0.91
CCL28-201ENST00000361115 ABCC12Q96J65 1359 aa9.37□□□□□ -0.91
CCL28-201ENST00000361115 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 CELF2O95319 508 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 ZSCAN23Q3MJ62 389 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 MPNDQ8N594 471 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 ARAP2Q8WZ64 1704 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 DCPSQ96C86 337 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 K7ELQ4 463 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 ZSCAN20P17040 1043 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 TM4SF4P48230 202 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 HDAC1Q13547 482 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 MAP1SQ66K74 1059 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 GOLGA6L22H0YM25 854 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 GNRH1P01148 92 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 DPP8Q6V1X1 898 aaPredicted RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 CLEC17AQ6ZS10 378 aa9.36□□□□□ -0.91
CCL28-201ENST00000361115 MTERF4Q7Z6M4 381 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 FTSJ3Q8IY81 847 aaKnown RBP9.36□□□□□ -0.91
CCL28-201ENST00000361115 FKBP1AP62942 108 aaKnown RBP9.35□□□□□ -0.91
CCL28-201ENST00000361115 ZKSCAN2Q63HK3 967 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 MCTP1Q6DN14 999 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 SASS6Q6UVJ0 657 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 DDX46Q7L014 1031 aaKnown RBP9.35□□□□□ -0.91
CCL28-201ENST00000361115 CCDC94Q9BW85 323 aaPredicted RBP9.35□□□□□ -0.91
CCL28-201ENST00000361115 A0A1W2PPC1 479 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
CCL28-201ENST00000361115 UTP14CQ5TAP6 766 aaKnown RBP9.35□□□□□ -0.91
CCL28-201ENST00000361115 A1BGP04217 495 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 TSC1Q92574 1164 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 LNPKQ9C0E8 428 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
CCL28-201ENST00000361115 NF2P35240 595 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
CCL28-201ENST00000361115 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 LMBRD1Q9NUN5 540 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 TAF1P21675 1872 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 ABCC4O15439 1325 aa9.34□□□□□ -0.91
CCL28-201ENST00000361115 CXCL9Q07325 125 aa9.34□□□□□ -0.92
CCL28-201ENST00000361115 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.92
CCL28-201ENST00000361115 WDR63Q8IWG1 891 aa9.34□□□□□ -0.92
CCL28-201ENST00000361115 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 VIL1P09327 827 aaKnown RBP9.33□□□□□ -0.92
CCL28-201ENST00000361115 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
CCL28-201ENST00000361115 TRIM27P14373 513 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 NBPF10Q6P3W6 841 aaKnown RBP9.33□□□□□ -0.92
CCL28-201ENST00000361115 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 TNNT2P45379 298 aaPredicted RBP9.33□□□□□ -0.92
CCL28-201ENST00000361115 EIF4A1P60842 406 aaKnown RBP9.33□□□□□ -0.92
CCL28-201ENST00000361115 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 RNF186Q9NXI6 227 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms