RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 MBD4O95243 580 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 UQCRFS1P1P0C7P4 283 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 NEO1Q92859 1461 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 CLTCL1P53675 1640 aa16.26■□□□□ 0.19
PCMTD1-201ENST00000360540 UBASH3AP57075 661 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 PATL2C9JE40 543 aaKnown RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 IGSF3O75054 1194 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 ZAP70P43403 619 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 KIF4BQ2VIQ3 1234 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 PHKBQ93100 1093 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 CHD1O14646 1710 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 hCG_1642624A0A1W2PR95 340 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 IBTKQ9P2D0 1353 aaPredicted RBP16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 LRRC24Q50LG9 513 aa16.25■□□□□ 0.19
PCMTD1-201ENST00000360540 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 GPAA1O43292 621 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 NAA16Q6N069 864 aaPredicted RBP16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 KIAA1328Q86T90 577 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 DHX58Q96C10 678 aa16.24■□□□□ 0.19
PCMTD1-201ENST00000360540 ZNF445P59923 1031 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 LIG1P18858 919 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 CEP135Q66GS9 1140 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 ARMT1Q9H993 441 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 IFNKQ9P0W0 207 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 FAM135BQ49AJ0 1406 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 UBA7P41226 1012 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 PLIN2Q99541 437 aa16.23■□□□□ 0.19
PCMTD1-201ENST00000360540 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 PHKG2P15735 406 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 GNG11P61952 73 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 ESR2Q92731 530 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 PUS3Q9BZE2 481 aaKnown RBP16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 A0A087WWV3 80 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 UTP14AQ9BVJ6 771 aaKnown RBP16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 PDCL3Q9H2J4 239 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 KAT14Q9H8E8 782 aa16.22■□□□□ 0.19
PCMTD1-201ENST00000360540 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
PCMTD1-201ENST00000360540 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
PCMTD1-201ENST00000360540 DBNLQ9UJU6 430 aaKnown RBP16.21■□□□□ 0.19
PCMTD1-201ENST00000360540 ZNF76P36508 570 aa16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 USP6P35125 1406 aa16.21■□□□□ 0.18
PCMTD1-201ENST00000360540 RFC4P35249 363 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 ZNF589Q86UQ0 364 aaPredicted RBP16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 CMTR1Q8N1G2 835 aaKnown RBP16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 NLRP3Q96P20 1036 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 CCDC181Q5TID7 509 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 CCDC102AQ96A19 550 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 SETDB2Q96T68 719 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 SEPT11Q9NVA2 429 aaKnown RBP16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 KIF1BO60333 1816 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 N4BP3O15049 544 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
PCMTD1-201ENST00000360540 TMCO3Q6UWJ1 677 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 TSPOAP1O95153 1857 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 LARGE1O95461 756 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 CTDSPL2Q05D32 466 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 PDE4BQ07343 736 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 KRT23Q9C075 422 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 ACBD3Q9H3P7 528 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 ARHGEF25Q86VW2 580 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 GSDMDP57764 484 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 CBX8Q9HC52 389 aa16.19■□□□□ 0.18
PCMTD1-201ENST00000360540 AOX1Q06278 1338 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms