RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 TUBB2AQ13885 445 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 TUBB2BQ9BVA1 445 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 RAB3IL1Q8TBN0 382 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 SEC24BO95487 1268 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 FAM184BQ9ULE4 1060 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 TMEM110-MUSTN1A8MSY1 372 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 ZBTB43O43298 467 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 MYL5Q02045 173 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 PSMD1Q99460 953 aa15.17■□□□□ 0.02
CCDC144A-203ENST00000360495 GCKP35557 465 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 AK2P54819 239 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 ASIC1P78348 528 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 CABS1Q96KC9 395 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 VCXQ9H320 206 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 VCX3BQ9H321 246 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 RFC1P35251 1148 aaPredicted RBP15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 SNRKQ9NRH2 765 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 SLC5A1P13866 664 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 ZNF445P59923 1031 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 CCDC174Q6PII3 467 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
CCDC144A-203ENST00000360495 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 CCDC38Q502W7 563 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 GOLGA6BA6NDN3 693 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 C8orf74Q6P047 294 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 NEK11Q8NG66 645 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 GJC1P36383 396 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 ZNF75DP51815 510 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 PPP1R7Q15435 360 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 KAT14Q9H8E8 782 aa15.15■□□□□ 0.02
CCDC144A-203ENST00000360495 TSC1Q92574 1164 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 VAT1LQ9HCJ6 419 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 ATP5DP30049 168 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 WTAPQ15007 396 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 DBF4Q9UBU7 674 aaPredicted RBP15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 ZNF853P0CG23 659 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 CCDC26Q8TAB7 109 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 MICAL1Q8TDZ2 1067 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
CCDC144A-203ENST00000360495 BAIAP2L1Q9UHR4 511 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 TTF2Q9UNY4 1162 aaKnown RBP15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 CASQ2O14958 399 aaPredicted RBP15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 PLCB3Q01970 1234 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 EHMT1Q9H9B1 1298 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 BICDL2A1A5D9 508 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 TSPY2A6NKD2 308 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 IL16Q14005 1332 aa15.13■□□□□ 0.01
CCDC144A-203ENST00000360495 TRMT1LQ7Z2T5 733 aaKnown RBP15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 RNF168Q8IYW5 571 aaPredicted RBP15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 MEIS3Q99687 375 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 TRIM75PA6NK02 468 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 RTN1Q16799 776 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 LRCH2Q5VUJ6 765 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 EEF2P13639 858 aaKnown RBP15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 ARHGEF2Q92974 986 aaKnown RBP15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 LRRC45Q96CN5 670 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 ZWINTO95229 277 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 CFAP157Q5JU67 520 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 FYB2Q5VWT5 728 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 MAP3K2Q9Y2U5 619 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 ATP6V0A2Q9Y487 856 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 PPFIA1Q13136 1202 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 WHAMMP3Q1A5X7 153 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 BICDL1Q6ZP65 573 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 VSIG1Q86XK7 387 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 IGSF22Q8N9C0 903 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 CAPN7Q9Y6W3 813 aa15.12■□□□□ 0.01
CCDC144A-203ENST00000360495 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 HGSO14964 777 aaPredicted RBP15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 ARL1P40616 181 aaPredicted RBP15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 UTP14CQ5TAP6 766 aaKnown RBP15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 AP1ARQ63HQ0 302 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 SYNCQ9H7C4 482 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 STARD3NLO95772 234 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 GBP7Q8N8V2 638 aaPredicted RBP15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 KIAA1524Q8TCG1 905 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 JAKMIP2Q96AA8 810 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 MCUR1Q96AQ8 359 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 MTUS1Q9ULD2 1270 aa15.11■□□□□ 0.01
CCDC144A-203ENST00000360495 ATP2A2P16615 1042 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms