RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 VSNL1P62760 191 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ADCK5Q3MIX3 580 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 KIRREL3Q8IZU9 778 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ETAA1Q9NY74 926 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 SAMM50Q9Y512 469 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ARHGEF5Q12774 1597 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 SKAP2O75563 359 aaPredicted RBP13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 NAA25Q14CX7 972 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 ARMC2Q8NEN0 867 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 RAB21Q9UL25 225 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 CAND2O75155 1236 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 CFAP45Q9UL16 551 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
SEPSECS-201ENST00000358971 TTC36A6NLP5 189 aa13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 CUTAO60888 179 aa13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 PTPN21Q16825 1174 aa13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 SH3GL3Q99963 347 aa13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.31
SEPSECS-201ENST00000358971 FANCAO15360 1455 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 ADCY2Q08462 1091 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 KAT14Q9H8E8 782 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 H3BQV1 296 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 BIN1O00499 593 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 ARHGAP6O43182 974 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 PEX19P40855 299 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 FANCCQ00597 558 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 STK3Q13188 491 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 IFFO2Q5TF58 517 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 PDILTQ8N807 584 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 NUCKS1Q9H1E3 243 aaKnown RBP13.08□□□□□ -0.32
SEPSECS-201ENST00000358971 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 SERPINC1P01008 464 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 HMOX1P09601 288 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 IRAK1P51617 712 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 DPCR1Q3MIW9 517 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 CEP85LQ5SZL2 805 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 RIN2Q8WYP3 895 aaPredicted RBP13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 EHD4Q9H223 541 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 IL1RAPL2Q9NP60 686 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 FCHSD2O94868 740 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 MSANTD4Q8NCY6 345 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
SEPSECS-201ENST00000358971 EME2A4GXA9 379 aaPredicted RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 TMCO5BA8MYB1 307 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 IPO7O95373 1038 aaKnown RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 TOP1P11387 765 aaKnown RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 PDE6BP35913 854 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 NUTM1Q86Y26 1132 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 AP1G2O75843 785 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 SYF2O95926 243 aaKnown RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 CDR1P51861 262 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 UBASH3AP57075 661 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 NFE2L2Q16236 605 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 TCEANC2Q96MN5 208 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 DUOX2Q9NRD8 1548 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 MYBL2P10244 700 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 ZC3H12AQ5D1E8 599 aaKnown RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 KCNB2Q92953 911 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 TATDN2Q93075 761 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 THOC1Q96FV9 657 aaKnown RBP13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 KIF9Q9HAQ2 790 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 KLC4Q9NSK0 619 aa13.06□□□□□ -0.32
SEPSECS-201ENST00000358971 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 MRPL12P52815 198 aaKnown RBP13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 GRIK3Q13003 919 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 DESI2Q9BSY9 194 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 RAB11FIP3O75154 756 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 BAG1Q99933 345 aaPredicted RBP13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ANKRD33BA6NCL7 494 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ME1P48163 572 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 TOGARAM2Q6ZUX3 1019 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 CCDC26Q8TAB7 109 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 CDC23Q9UJX2 597 aa13.05□□□□□ -0.32
SEPSECS-201ENST00000358971 EZRP15311 586 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms