RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 IFFO1Q0D2I5 559 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 SPTY2D1Q68D10 685 aaPredicted RBP15.69■□□□□ 0.1
VCP-201ENST00000358901 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
VCP-201ENST00000358901 RNMTO43148 476 aaKnown RBP15.68■□□□□ 0.1
VCP-201ENST00000358901 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
VCP-201ENST00000358901 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.1
VCP-201ENST00000358901 PPP1R1BQ9UD71 204 aaPredicted RBP15.68■□□□□ 0.1
VCP-201ENST00000358901 USP19O94966 1318 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 C6orf229H3BNL8 230 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 LDHCP07864 332 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 ZBTB9Q96C00 473 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 WDR7Q9Y4E6 1490 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 BAG3O95817 575 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 DYDC1Q8WWB3 177 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 DISP1Q96F81 1524 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CTAGE15A4D2H0 777 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CTAGE8P0CG41 777 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 FAM160A1Q05DH4 1040 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CCDC152Q4G0S7 254 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CTAGE6Q86UF2 777 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CTAGE4Q8IX94 777 aa15.68■□□□□ 0.1
VCP-201ENST00000358901 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
VCP-201ENST00000358901 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 STAT6P42226 847 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 BRAPQ7Z569 592 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 FAM114A1Q8IWE2 563 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 NCOA5Q9HCD5 579 aaKnown RBP15.67■□□□□ 0.1
VCP-201ENST00000358901 RMND1Q9NWS8 449 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 BRD1O95696 1058 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 PKP1Q13835 747 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 IP6K1Q92551 441 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 ZFP91Q96JP5 570 aaPredicted RBP15.67■□□□□ 0.1
VCP-201ENST00000358901 NAA15Q9BXJ9 866 aaKnown RBP15.67■□□□□ 0.1
VCP-201ENST00000358901 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■□□□□ 10.9
VCP-201ENST00000358901 CCDC175P0C221 793 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 KCNA6P17658 529 aa15.67■□□□□ 0.1
VCP-201ENST00000358901 KARSQ15046 597 aaKnown RBP15.67■□□□□ 0.1
VCP-201ENST00000358901 TRMT1LQ7Z2T5 733 aaKnown RBP15.67■□□□□ 0.1
VCP-201ENST00000358901 IBSPP21815 317 aaPredicted RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 DRC1Q96MC2 740 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 CCDC94Q9BW85 323 aaPredicted RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 EXOC1Q9NV70 894 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 SRRTQ9BXP5 876 aaKnown RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 HSPA4P34932 840 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 CYLC1P35663 651 aaPredicted RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 PRPF4BQ13523 1007 aaKnown RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 UTP14AQ9BVJ6 771 aaKnown RBP15.66■□□□□ 0.1
VCP-201ENST00000358901 GOPCQ9HD26 462 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 NDUFB9Q9Y6M9 179 aa15.66■□□□□ 0.1
VCP-201ENST00000358901 PSMA7O14818 248 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 EHBP1Q8NDI1 1231 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 RNF187Q5TA31 235 aaPredicted RBP15.65■□□□□ 0.1
VCP-201ENST00000358901 NAA16Q6N069 864 aaPredicted RBP15.65■□□□□ 0.1
VCP-201ENST00000358901 ABCC4O15439 1325 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 GAS2L3Q86XJ1 694 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 LEO1Q8WVC0 666 aaPredicted RBP15.65■□□□□ 0.1
VCP-201ENST00000358901 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
VCP-201ENST00000358901 CHAMP1Q96JM3 812 aa15.65■□□□□ 0.1
VCP-201ENST00000358901 MACROD2A1Z1Q3 448 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 TUBB4AP04350 444 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 MYL5Q02045 173 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 EDC4Q6P2E9 1401 aaKnown RBP15.64■□□□□ 0.09
VCP-201ENST00000358901 MAGI2Q86UL8 1455 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 A0A1B0GUL7 405 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 TNNI3KQ59H18 835 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 ANKRD18AQ8IVF6 992 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 CBX8Q9HC52 389 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 FPGT-TNNI3KV9GXZ4 949 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 AOX1Q06278 1338 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 CETN2P41208 172 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 SLF2Q8IX21 1173 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 PALD1Q9ULE6 856 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 ATL3Q6DD88 541 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 ZNF790Q6PG37 636 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 TIGD1Q96MW7 591 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 FAM107BQ9H098 131 aa15.64■□□□□ 0.09
VCP-201ENST00000358901 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 SPAG5Q96R06 1193 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 HOXB7P09629 217 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 ASIC1P78348 528 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 WWC2Q6AWC2 1192 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 CDC37L1Q7L3B6 337 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 RIOK3O14730 519 aaKnown RBP15.63■□□□□ 0.09
VCP-201ENST00000358901 MAATS1Q7Z4T9 603 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 MAGEB6Q8N7X4 407 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 FAM89AQ96GI7 184 aa15.63■□□□□ 0.09
VCP-201ENST00000358901 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms